Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL5A2P05997 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL5A2P05997 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
COL5A2P05997 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL5A2P05997 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
COL5A2P05997 RNA5SP123-201ENST00000363244 119 ntBASIC7.24□□□□□ -1.25
COL5A2P05997 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC7.24□□□□□ -1.25
COL5A2P05997 RPSAP35-201ENST00000413753 818 ntBASIC7.24□□□□□ -1.25
COL5A2P05997 EIF2S2P3-201ENST00000428356 999 ntBASIC7.24□□□□□ -1.25
COL5A2P05997 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC7.24□□□□□ -1.25
COL5A2P05997 AC079080.1-201ENST00000479841 822 ntBASIC7.24□□□□□ -1.25
COL5A2P05997 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC7.24□□□□□ -1.25
COL5A2P05997 RNA5SP373-201ENST00000517271 95 ntBASIC7.24□□□□□ -1.25
COL5A2P05997 AC078899.1-201ENST00000521432 1185 ntBASIC7.24□□□□□ -1.25
COL5A2P05997 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC7.24□□□□□ -1.25
COL5A2P05997 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC7.24□□□□□ -1.25
COL5A2P05997 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC7.24□□□□□ -1.25
COL5A2P05997 AC060766.1-201ENST00000590824 627 ntBASIC7.24□□□□□ -1.25
COL5A2P05997 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.24□□□□□ -1.25
COL5A2P05997 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.24□□□□□ -1.25
COL5A2P05997 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC7.24□□□□□ -1.25
COL5A2P05997 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
COL5A2P05997 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL5A2P05997 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL5A2P05997 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL5A2P05997 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC7.24□□□□□ -1.25
COL5A2P05997 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL5A2P05997 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL5A2P05997 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.24□□□□□ -1.25
COL5A2P05997 AL031651.1-201ENST00000615357 1438 ntBASIC7.24□□□□□ -1.25
COL5A2P05997 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL5A2P05997 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL5A2P05997 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
COL5A2P05997 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
COL5A2P05997 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL5A2P05997 AC026951.1-201ENST00000559530 2459 ntBASIC7.24□□□□□ -1.25
COL5A2P05997 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL5A2P05997 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL5A2P05997 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL5A2P05997 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
COL5A2P05997 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL5A2P05997 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.24□□□□□ -1.25
COL5A2P05997 SNORA11-201ENST00000408789 128 ntBASIC7.24□□□□□ -1.25
COL5A2P05997 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.24□□□□□ -1.25
COL5A2P05997 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC7.24□□□□□ -1.25
COL5A2P05997 NANOGP9-201ENST00000439890 892 ntBASIC7.24□□□□□ -1.25
COL5A2P05997 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC7.24□□□□□ -1.25
COL5A2P05997 MEMO1P4-201ENST00000453590 386 ntBASIC7.24□□□□□ -1.25
COL5A2P05997 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC7.24□□□□□ -1.25
COL5A2P05997 RN7SL738P-201ENST00000470264 297 ntBASIC7.24□□□□□ -1.25
COL5A2P05997 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC7.24□□□□□ -1.25
COL5A2P05997 EIF3KP3-201ENST00000514461 639 ntBASIC7.24□□□□□ -1.25
COL5A2P05997 AL671862.1-201ENST00000515851 349 ntBASIC7.24□□□□□ -1.25
COL5A2P05997 SCARNA16.4-201ENST00000516956 187 ntBASIC7.24□□□□□ -1.25
COL5A2P05997 AP002373.2-201ENST00000541631 1060 ntBASIC7.24□□□□□ -1.25
COL5A2P05997 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC7.24□□□□□ -1.25
COL5A2P05997 AC074101.1-201ENST00000637861 241 ntBASIC7.24□□□□□ -1.25
COL5A2P05997 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.23□□□□□ -1.25
COL5A2P05997 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC7.23□□□□□ -1.25
COL5A2P05997 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.23□□□□□ -1.25
COL5A2P05997 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.23□□□□□ -1.25
COL5A2P05997 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC7.23□□□□□ -1.25
COL5A2P05997 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL5A2P05997 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL5A2P05997 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
COL5A2P05997 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC7.23□□□□□ -1.25
COL5A2P05997 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL5A2P05997 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL5A2P05997 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL5A2P05997 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL5A2P05997 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.23□□□□□ -1.25
COL5A2P05997 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL5A2P05997 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL5A2P05997 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
COL5A2P05997 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL5A2P05997 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
COL5A2P05997 RNU1-146P-201ENST00000364015 165 ntBASIC7.23□□□□□ -1.25
COL5A2P05997 AL009179.1-201ENST00000406085 265 ntBASIC7.23□□□□□ -1.25
COL5A2P05997 AC011753.3-201ENST00000443436 406 ntBASIC7.23□□□□□ -1.25
COL5A2P05997 AL451063.1-201ENST00000450164 1133 ntBASIC7.23□□□□□ -1.25
COL5A2P05997 AC092647.2-201ENST00000452998 253 ntBASIC7.23□□□□□ -1.25
COL5A2P05997 Z92846.1-201ENST00000456203 268 ntBASIC7.23□□□□□ -1.25
COL5A2P05997 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL5A2P05997 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
COL5A2P05997 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC7.23□□□□□ -1.25
COL5A2P05997 BNIP3P1-201ENST00000547295 580 ntBASIC7.23□□□□□ -1.25
COL5A2P05997 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.23□□□□□ -1.25
COL5A2P05997 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
COL5A2P05997 AC234771.5-201ENST00000600161 514 ntBASIC7.23□□□□□ -1.25
COL5A2P05997 MIR7703-201ENST00000620784 77 ntBASIC7.23□□□□□ -1.25
COL5A2P05997 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL5A2P05997 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL5A2P05997 AC012618.3-205ENST00000637896 1496 ntBASIC7.23□□□□□ -1.25
COL5A2P05997 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL5A2P05997 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.22□□□□□ -1.25
COL5A2P05997 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
COL5A2P05997 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL5A2P05997 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL5A2P05997 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL5A2P05997 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms