Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQA1P01909 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
HLA-DQA1P01909 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQA1P01909 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DQA1P01909 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DQA1P01909 AC104964.3-201ENST00000606115 2860 ntBASIC4.26□□□□□ -1.73
HLA-DQA1P01909 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.26□□□□□ -1.73
HLA-DQA1P01909 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HLA-DQA1P01909 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DQA1P01909 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 NEAT1-202ENST00000501122 22743 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC006206.1-201ENST00000544842 3387 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 CR383656.5-201ENST00000547616 1340 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 RNA5SP346-201ENST00000363541 121 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC003045.1-201ENST00000398779 713 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 OOSP1-201ENST00000398992 1270 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 PRELID1P1-201ENST00000403549 660 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 RN7SKP286-201ENST00000410894 299 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AL360013.1-201ENST00000419031 858 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 OSTCP4-201ENST00000424397 449 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 RPL12P12-201ENST00000424633 501 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 MGAT2P2-201ENST00000427194 797 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 HSPD1P12-201ENST00000429127 1069 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 GTF3AP6-201ENST00000432585 986 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 BTG3P1-201ENST00000435859 716 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 GTF2IP14-201ENST00000441415 586 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 CXCR2P1-202ENST00000443392 1074 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC016772.1-201ENST00000444170 1261 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AL161722.1-201ENST00000446972 1032 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC068491.1-201ENST00000449539 1241 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 RPL12P31-201ENST00000478433 450 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC135999.1-201ENST00000478962 479 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 GM2AP2-201ENST00000491764 562 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC138517.1-201ENST00000515724 568 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 CYCSP25-201ENST00000525280 316 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC135983.3-201ENST00000528049 1226 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC027026.1-201ENST00000532323 742 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AL390726.5-202ENST00000564800 256 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC005479.3-201ENST00000602790 431 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 MIR6885-201ENST00000612241 66 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC022106.1-201ENST00000612834 766 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 AL731532.2-201ENST00000623542 1953 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 SCN1A-220ENST00000641603 12506 ntBASIC4.25□□□□□ -1.73
HLA-DQA1P01909 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQA1P01909 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC117409.1-201ENST00000470499 1310 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC144833.1-201ENST00000567953 4089 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms