Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AL136298.2-201ENST00000556497 1570 ntBASIC8.26□□□□□ -1.09
HOXA2O43364 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
HOXA2O43364 ZNF101P1-201ENST00000435701 1720 ntBASIC8.26□□□□□ -1.09
HOXA2O43364 NLRP9P1-201ENST00000540920 2655 ntBASIC8.26□□□□□ -1.09
HOXA2O43364 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HOXA2O43364 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HOXA2O43364 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC8.25□□□□□ -1.09
HOXA2O43364 ASNSP6-201ENST00000592770 1618 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 AC087045.3-201ENST00000623046 2468 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 YES1-203ENST00000577961 4554 ntTSL 5 BASIC8.25□□□□□ -1.09
HOXA2O43364 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC8.25□□□□□ -1.09
HOXA2O43364 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC8.25□□□□□ -1.09
HOXA2O43364 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 RNA5SP260-201ENST00000363849 111 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
HOXA2O43364 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 YWHAZP6-201ENST00000399764 738 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC8.25□□□□□ -1.09
HOXA2O43364 AL022724.1-201ENST00000412132 554 ntTSL 3 BASIC8.25□□□□□ -1.09
HOXA2O43364 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC8.25□□□□□ -1.09
HOXA2O43364 HMGB1P11-201ENST00000413899 637 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC8.25□□□□□ -1.09
HOXA2O43364 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC8.25□□□□□ -1.09
HOXA2O43364 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC8.25□□□□□ -1.09
HOXA2O43364 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.25□□□□□ -1.09
HOXA2O43364 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC8.25□□□□□ -1.09
HOXA2O43364 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC8.25□□□□□ -1.09
HOXA2O43364 USP9YP15-201ENST00000442391 422 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC8.25□□□□□ -1.09
HOXA2O43364 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC8.25□□□□□ -1.09
HOXA2O43364 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC8.25□□□□□ -1.09
HOXA2O43364 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC8.25□□□□□ -1.09
HOXA2O43364 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8.25□□□□□ -1.09
HOXA2O43364 RPL7AP52-201ENST00000458096 790 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 RPS10P28-201ENST00000480396 498 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 AC091544.1-201ENST00000484702 348 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 HMGN2P25-201ENST00000486956 268 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 RPL22-208ENST00000497965 786 ntTSL 2 BASIC8.25□□□□□ -1.09
HOXA2O43364 AC108078.3-201ENST00000502633 489 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC8.25□□□□□ -1.09
HOXA2O43364 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC8.25□□□□□ -1.09
HOXA2O43364 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC8.25□□□□□ -1.09
HOXA2O43364 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC8.25□□□□□ -1.09
HOXA2O43364 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC8.25□□□□□ -1.09
HOXA2O43364 OR4A12P-201ENST00000530847 918 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC8.25□□□□□ -1.09
HOXA2O43364 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC8.25□□□□□ -1.09
HOXA2O43364 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC8.25□□□□□ -1.09
HOXA2O43364 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC8.25□□□□□ -1.09
HOXA2O43364 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC8.25□□□□□ -1.09
HOXA2O43364 AC015917.1-201ENST00000579654 510 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 KPNA2P3-201ENST00000584190 848 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC8.25□□□□□ -1.09
HOXA2O43364 BNIP3P22-201ENST00000593399 556 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC8.25□□□□□ -1.09
HOXA2O43364 AP001429.1-201ENST00000602568 530 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 AL136295.6-201ENST00000610486 658 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 MIR6883-201ENST00000614952 78 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 AL451054.1-201ENST00000621770 772 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 AC073862.4-201ENST00000622982 854 ntBASIC8.25□□□□□ -1.09
HOXA2O43364 METAP1-212ENST00000625963 147 ntTSL 5 BASIC8.25□□□□□ -1.09
HOXA2O43364 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC8.25□□□□□ -1.09
HOXA2O43364 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC8.25□□□□□ -1.09
HOXA2O43364 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXA2O43364 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HOXA2O43364 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.24□□□□□ -1.09
HOXA2O43364 CCT4P2-201ENST00000233836 1548 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXA2O43364 LRRC49-203ENST00000443425 3085 ntTSL 2 BASIC8.24□□□□□ -1.09
HOXA2O43364 MT-RNR2-201ENST00000387347 1559 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXA2O43364 AC093225.1-201ENST00000506867 1408 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 Y_RNA.72-201ENST00000362894 103 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 SNORA73B-201ENST00000363217 204 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 RNU6-1085P-201ENST00000363576 107 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 RNA5SP302-201ENST00000364896 100 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HOXA2O43364 RNU6-723P-201ENST00000383973 107 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 MIR16-1-201ENST00000385271 89 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms