Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TMEM88BA6NKF7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TMEM88BA6NKF7 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TMEM88BA6NKF7 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
TMEM88BA6NKF7 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AC091305.2-201ENST00000624049 1576 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 R3HDM2P1-201ENST00000505381 1960 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 RNU6-1339P-201ENST00000363574 91 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 Y_RNA.560-201ENST00000384689 102 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AC093719.1-202ENST00000392735 373 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AL031577.2-201ENST00000404133 280 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AL139805.1-201ENST00000407837 289 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 MIR1178-201ENST00000408396 91 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 DPY19L1P2-201ENST00000426647 915 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 MTCO1P52-201ENST00000433928 531 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 USP9YP22-201ENST00000438971 294 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AL161636.2-201ENST00000445179 927 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 RANP1-206ENST00000455094 651 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 RN7SKP35-201ENST00000517210 151 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AC060775.1-201ENST00000518241 520 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 NAP1L1P1-201ENST00000524793 1063 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AC079905.1-201ENST00000549280 475 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 OR7E18P-201ENST00000592589 702 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AL451074.6-201ENST00000608512 729 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AK6-205ENST00000618980 483 ntTSL 2 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AP003072.4-201ENST00000624580 310 ntBASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.97□□□□□ -1.13
TMEM88BA6NKF7 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
TMEM88BA6NKF7 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
TMEM88BA6NKF7 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.96□□□□□ -1.13
TMEM88BA6NKF7 UGT2B26P-201ENST00000508672 1613 ntBASIC7.96□□□□□ -1.13
TMEM88BA6NKF7 AC123769.1-201ENST00000530992 3192 ntBASIC7.96□□□□□ -1.13
TMEM88BA6NKF7 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
TMEM88BA6NKF7 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.13
TMEM88BA6NKF7 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.96□□□□□ -1.13
TMEM88BA6NKF7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC7.96□□□□□ -1.13
TMEM88BA6NKF7 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.96□□□□□ -1.13
TMEM88BA6NKF7 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
TMEM88BA6NKF7 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.13
TMEM88BA6NKF7 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.96□□□□□ -1.13
TMEM88BA6NKF7 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
TMEM88BA6NKF7 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
TMEM88BA6NKF7 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
TMEM88BA6NKF7 TMSB4XP2-201ENST00000335179 210 ntBASIC7.96□□□□□ -1.14
TMEM88BA6NKF7 IL6STP1-201ENST00000346911 1020 ntBASIC7.96□□□□□ -1.14
TMEM88BA6NKF7 RNU6-543P-201ENST00000362576 108 ntBASIC7.96□□□□□ -1.14
TMEM88BA6NKF7 RNA5SP284-201ENST00000384547 118 ntBASIC7.96□□□□□ -1.14
TMEM88BA6NKF7 NACAP7-201ENST00000407371 609 ntBASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms