Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 RNU6-723P-201ENST00000383973 107 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 RNU6-98P-201ENST00000384173 107 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 RPL5P35-201ENST00000398869 816 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AL356057.2-201ENST00000403318 432 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 HMGB1P11-201ENST00000413899 637 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AC092042.2-201ENST00000417304 331 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 RPL21P111-201ENST00000418453 477 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AL358942.1-201ENST00000418595 1178 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 ATP5G1P5-201ENST00000429024 411 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 ANKRD30BP3-201ENST00000444850 1070 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 RN7SL368P-201ENST00000473384 277 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AC013828.1-201ENST00000481845 158 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 HMGN2P25-201ENST00000486956 268 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AHI1-208ENST00000488690 712 ntTSL 5 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AC108078.1-201ENST00000508073 725 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 NDUFB4P2-201ENST00000509515 391 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 MTCO1P30-201ENST00000515244 580 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 RNU6-430P-201ENST00000517078 107 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AC087280.1-201ENST00000530632 1003 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 COX4I1P1-201ENST00000554239 509 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AC012146.2-201ENST00000576545 416 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 SS18L2P2-201ENST00000583960 235 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AL161729.4-201ENST00000604650 476 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AC008277.2-201ENST00000605196 797 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AC008250.2-201ENST00000615261 205 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AP001506.1-201ENST00000615444 211 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AL359880.1-201ENST00000621879 266 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AP003122.6-201ENST00000623831 495 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 MKKS-204ENST00000639674 192 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 SLC9B1P3-201ENST00000452667 1334 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 AL031985.3-201ENST00000565390 2449 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 IFIT1P1-201ENST00000400497 1449 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 EEF1A1P2-201ENST00000553854 1447 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AL157700.1-201ENST00000561973 1432 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms