Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 RNFT1P3-201ENST00000340898 1052 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 MTND4P11-201ENST00000417020 1058 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 BX284632.2-201ENST00000421091 399 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AC007568.1-201ENST00000422912 471 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AC017019.1-201ENST00000426129 261 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AL355355.1-201ENST00000442900 793 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 C1DP3-201ENST00000455013 423 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AC092824.1-201ENST00000483524 576 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 RN7SL214P-201ENST00000487317 265 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 SCARNA21.2-201ENST00000516600 166 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AP000648.1-201ENST00000529682 397 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AC016839.1-201ENST00000578162 867 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AC233702.7-202ENST00000582941 211 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AL031601.1-201ENST00000605702 394 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AL645933.2-201ENST00000606743 1207 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AC022106.1-201ENST00000612834 766 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AL137246.2-201ENST00000613439 662 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AC090506.2-201ENST00000624521 419 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 OR52B3P-201ENST00000314715 928 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 SNORD8-201ENST00000363915 110 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 RPS3AP2-201ENST00000407190 754 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 SDHDP6-201ENST00000414693 480 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 UBE2V1P14-201ENST00000415815 558 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 AC023141.6-201ENST00000429418 337 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 AL161636.2-201ENST00000445179 927 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 MORF4L1P4-201ENST00000450245 976 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 AL122020.1-201ENST00000472287 459 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 RN7SL193P-201ENST00000491708 276 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 TPT1P8-201ENST00000510120 555 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 AC027338.1-201ENST00000514840 825 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 AC068305.2-201ENST00000550567 1205 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 AP005119.1-201ENST00000580956 292 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 AC027243.2-201ENST00000602530 724 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 AL136131.3-201ENST00000607600 188 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 AC126175.1-201ENST00000617041 758 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 AC026367.3-201ENST00000619032 590 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 AC241377.1-201ENST00000619797 406 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 AL049777.1-201ENST00000622740 518 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 AP001284.1-201ENST00000528393 2118 ntBASIC6.55□□□□□ -1.36
SSX2IPQ9Y2D8 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms