Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RN7SL353P-201ENST00000579902 252 ntBASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 MIR3910-1-201ENST00000580936 111 ntBASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 EIF5AP3-201ENST00000589460 462 ntBASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 AL162373.1-201ENST00000620433 407 ntBASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 AC025574.1-201ENST00000554784 1653 ntBASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 AC096992.2-201ENST00000609553 1684 ntBASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 DCLRE1C-209ENST00000378278 2354 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 SND1-IT1-201ENST00000623342 2481 ntBASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 AC127070.5-201ENST00000623177 2104 ntBASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 ZNF807-201ENST00000328088 1707 ntBASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 AC125232.1-201ENST00000452554 1408 ntBASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
VPS9D1Q9Y2B5 MEST-203ENST00000378576 2180 ntTSL 5 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 GAPDHP24-201ENST00000328713 983 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 OR2T6-201ENST00000355728 927 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 RNU6-1032P-201ENST00000384100 107 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 RNU6-1158P-201ENST00000391167 107 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 RNU6-1304P-201ENST00000411374 106 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 LYPLA2P3-201ENST00000417429 576 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 HSPE1P1-201ENST00000421494 318 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 TXNP1-201ENST00000441872 371 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AC006159.1-201ENST00000452009 386 ntTSL 5 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AC078785.3-201ENST00000476607 425 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 RPL12P8-201ENST00000482081 580 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AC110794.1-201ENST00000505816 425 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 RPL10P19-201ENST00000519013 301 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 RANP9-201ENST00000519957 271 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 IGLV3-7-201ENST00000522952 271 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 RNF185-AS1-201ENST00000526089 353 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 OR4A7P-201ENST00000531463 910 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 RRN3P3-201ENST00000549207 578 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AL023284.4-201ENST00000564248 374 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AC010650.1-201ENST00000567559 494 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AC096708.1-201ENST00000584419 658 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AC087289.3-203ENST00000587556 550 ntAPPRIS P5 TSL 4 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AC007998.3-202ENST00000591141 697 ntTSL 3 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 EXOSC3P2-201ENST00000594464 497 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AC010323.2-201ENST00000596405 594 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AC013553.3-201ENST00000612943 615 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AC027139.2-201ENST00000615639 448 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 ZNHIT3-204ENST00000617429 951 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AC008957.2-201ENST00000618632 396 ntTSL 5 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AC069542.2-201ENST00000624816 216 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 SNTG1-207ENST00000522124 3504 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 MTND5P30-201ENST00000452896 1731 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 OR4G1P-203ENST00000641984 1631 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 AC092656.1-201ENST00000503243 2097 ntTSL 2 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 RPL4P3-201ENST00000428881 1311 ntBASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VPS9D1Q9Y2B5 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC8.27□□□□□ -1.08
VPS9D1Q9Y2B5 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
VPS9D1Q9Y2B5 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms