Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 HSPD1P7-201ENST00000447985 1686 ntBASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 SNORA16A-201ENST00000384342 137 ntBASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 PPP2R2DP1-201ENST00000420526 637 ntBASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 RNGTTP1-201ENST00000420965 728 ntBASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 TMEM183AP1-205ENST00000432739 290 ntBASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 AC106730.2-201ENST00000566641 540 ntBASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 AL121886.1-201ENST00000358609 435 ntBASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 RPL23AP17-201ENST00000401064 499 ntBASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 TPT1P13-201ENST00000449760 499 ntBASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 AL389915.2-201ENST00000454576 441 ntBASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 RPS29P33-201ENST00000456717 146 ntBASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 AC083982.1-201ENST00000485679 344 ntBASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 RNU6-941P-201ENST00000516346 108 ntBASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 OR11J2P-201ENST00000555298 907 ntBASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 AL513327.3-201ENST00000602618 469 ntBASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 AC069307.1-201ENST00000602820 447 ntBASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 OLMALINC-203ENST00000641087 3779 ntBASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SHANK2Q9UPX8 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC8.27□□□□□ -1.08
SHANK2Q9UPX8 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC8.27□□□□□ -1.08
SHANK2Q9UPX8 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC8.27□□□□□ -1.08
SHANK2Q9UPX8 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 RNU1-136P-201ENST00000384181 164 ntBASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 RNF10P1-201ENST00000418589 369 ntBASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 HMGB1P44-201ENST00000508597 572 ntBASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 RN7SKP253-201ENST00000516424 309 ntBASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 ATP5A1P4-201ENST00000556888 1605 ntBASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 AL162456.1-201ENST00000634535 2006 ntBASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SHANK2Q9UPX8 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 RNU1-146P-201ENST00000364015 165 ntBASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 AL035419.1-201ENST00000397037 564 ntBASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 DBIP1-201ENST00000401435 260 ntBASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 RPSAP35-201ENST00000413753 818 ntBASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 AL049745.1-201ENST00000433953 286 ntBASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 HMGB1P40-201ENST00000525121 540 ntBASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 AP002505.2-201ENST00000623585 696 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms