Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC005514.1-201ENST00000623521 208 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 EEF1A1P12-201ENST00000443590 1346 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC078880.4-201ENST00000617627 1749 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 ICE2P1-201ENST00000512800 1849 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 EML5-201ENST00000380664 5910 ntTSL 5 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 PRELID1P1-201ENST00000403549 660 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 TPMTP3-201ENST00000411928 735 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AL356968.2-201ENST00000412769 1257 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AL593856.1-201ENST00000419949 805 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AC245452.2-201ENST00000435222 392 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 LARP1BP3-201ENST00000437229 869 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 ZNF619P1-201ENST00000446539 752 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AL118496.2-201ENST00000448300 230 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 FGF7P6-202ENST00000451282 293 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 RPL21P134-201ENST00000453468 483 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AC138409.2-202ENST00000507274 458 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 snoZ278.1-201ENST00000517059 112 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 IGLVI-42-201ENST00000522485 381 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 MTCO1P40-201ENST00000574371 625 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AL645933.2-201ENST00000606743 1207 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AC019131.2-201ENST00000609071 870 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AC026951.2-201ENST00000613847 241 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 uc_338.31-201ENST00000615595 186 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AC138932.5-201ENST00000617759 563 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AC011477.1-204ENST00000623416 1325 ntBASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
ZC3H4Q9UPT8 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 Y_RNA.813-201ENST00000364639 102 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 RN7SKP78-201ENST00000364711 318 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AL035419.1-201ENST00000397037 564 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AL355375.1-201ENST00000405686 392 ntBASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms