Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 MIR4260-201ENST00000583107 67 ntBASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 FAM72A-208ENST00000607379 1139 ntBASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 MIR6886-201ENST00000619864 61 ntBASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 AL161756.3-201ENST00000641216 2071 ntBASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 AC007842.1-201ENST00000597336 2039 ntBASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 MTCO1P11-201ENST00000429111 1528 ntBASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AL357752.1-201ENST00000412817 349 ntBASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 GAPDHP48-201ENST00000436626 961 ntBASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AC017007.3-201ENST00000479865 435 ntBASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AC022215.1-201ENST00000481770 362 ntBASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AC012123.2-201ENST00000485809 248 ntBASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AC009120.1-201ENST00000493458 473 ntBASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AC074087.1-201ENST00000512059 724 ntBASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AC021678.3-201ENST00000517893 476 ntBASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AC139365.2-201ENST00000517972 253 ntBASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 HMGB1P42-201ENST00000532126 553 ntBASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 NPM1P5-201ENST00000557228 838 ntBASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 MIR4505-201ENST00000582238 73 ntBASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AP000894.4-201ENST00000610185 483 ntBASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AC241377.1-201ENST00000619797 406 ntBASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AL353684.1-201ENST00000622677 1120 ntBASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AC069542.2-201ENST00000624816 216 ntBASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AL049767.1-202ENST00000637826 242 ntBASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AL355488.2-201ENST00000609909 2850 ntBASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.8□□□□□ -1.32
CLIP2Q9UDT6 AC004076.2-201ENST00000620532 3323 ntBASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 AC092451.3-201ENST00000625067 1343 ntBASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 RNA5SP46-201ENST00000362370 120 ntBASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 SNORA64.1-201ENST00000362600 132 ntBASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 U3.10-201ENST00000364459 214 ntBASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 NPM1P37-201ENST00000403105 874 ntBASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 RN7SKP229-201ENST00000410465 302 ntBASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 RN7SKP293-201ENST00000411389 296 ntBASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 EEF1B2P6-201ENST00000445713 673 ntBASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 RPL32P33-201ENST00000487023 394 ntBASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 snoU109.5-201ENST00000516231 132 ntBASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 AC099654.3-201ENST00000447087 1546 ntBASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 SAMM50P1-201ENST00000455403 1399 ntBASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 AP004607.3-201ENST00000530354 3915 ntBASIC6.79□□□□□ -1.32
CLIP2Q9UDT6 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 AC027279.4-201ENST00000624371 2072 ntBASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms