Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 AC011225.1-201ENST00000457751 369 ntBASIC5.42□□□□□ -1.54
CCDC88CQ9P219 AC087672.1-201ENST00000479876 766 ntBASIC5.42□□□□□ -1.54
CCDC88CQ9P219 AL136038.1-201ENST00000497246 351 ntBASIC5.42□□□□□ -1.54
CCDC88CQ9P219 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 GAPDHP62-201ENST00000515313 990 ntBASIC5.42□□□□□ -1.54
CCDC88CQ9P219 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 SCARNA6.1-201ENST00000516989 238 ntBASIC5.42□□□□□ -1.54
CCDC88CQ9P219 OR7E18P-201ENST00000592589 702 ntBASIC5.42□□□□□ -1.54
CCDC88CQ9P219 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 AC127024.6-201ENST00000621598 424 ntBASIC5.42□□□□□ -1.54
CCDC88CQ9P219 AL390318.1-201ENST00000624564 687 ntBASIC5.42□□□□□ -1.54
CCDC88CQ9P219 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 AC027279.4-201ENST00000624371 2072 ntBASIC5.42□□□□□ -1.54
CCDC88CQ9P219 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 OR10T1P-201ENST00000424327 947 ntBASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AL627308.1-201ENST00000435693 821 ntBASIC5.41□□□□□ -1.54
CCDC88CQ9P219 RPS3AP38-201ENST00000435889 763 ntBASIC5.41□□□□□ -1.54
CCDC88CQ9P219 RPS26P41-201ENST00000450370 284 ntBASIC5.41□□□□□ -1.54
CCDC88CQ9P219 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 TPM3P3-201ENST00000521343 354 ntBASIC5.41□□□□□ -1.54
CCDC88CQ9P219 IGKV2-18-201ENST00000522607 343 ntBASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 MIR1269B-201ENST00000580405 75 ntBASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AC063977.5-201ENST00000601044 974 ntBASIC5.41□□□□□ -1.54
CCDC88CQ9P219 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 YES1P1-201ENST00000418510 1628 ntBASIC5.41□□□□□ -1.54
CCDC88CQ9P219 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AC114774.1-201ENST00000507410 1770 ntBASIC5.41□□□□□ -1.54
CCDC88CQ9P219 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AC074087.1-201ENST00000512059 724 ntBASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 MIR4443-201ENST00000585052 53 ntBASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AC060780.2-201ENST00000589047 198 ntBASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AL049840.6-202ENST00000603373 279 ntBASIC5.41□□□□□ -1.54
CCDC88CQ9P219 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC88CQ9P219 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC88CQ9P219 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC88CQ9P219 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
CCDC88CQ9P219 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC88CQ9P219 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC88CQ9P219 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC88CQ9P219 NANOGP4-201ENST00000427230 913 ntBASIC5.4□□□□□ -1.54
CCDC88CQ9P219 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC88CQ9P219 MED28P3-201ENST00000444288 531 ntBASIC5.4□□□□□ -1.54
CCDC88CQ9P219 RPS27AP2-201ENST00000457576 465 ntBASIC5.4□□□□□ -1.54
CCDC88CQ9P219 BX284632.1-201ENST00000478218 541 ntBASIC5.4□□□□□ -1.54
CCDC88CQ9P219 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC88CQ9P219 AC009120.1-201ENST00000493458 473 ntBASIC5.4□□□□□ -1.54
CCDC88CQ9P219 RN7SL466P-201ENST00000497546 295 ntBASIC5.4□□□□□ -1.54
CCDC88CQ9P219 RPS17P5-201ENST00000498293 408 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms