Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC3.83□□□□□ -1.8
SND1-IT1Q9HBX3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SND1-IT1Q9HBX3 AC217777.1-201ENST00000570034 1471 ntBASIC3.83□□□□□ -1.8
SND1-IT1Q9HBX3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
SND1-IT1Q9HBX3 AC018717.1-201ENST00000457712 1505 ntBASIC3.83□□□□□ -1.8
SND1-IT1Q9HBX3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC3.83□□□□□ -1.8
SND1-IT1Q9HBX3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SND1-IT1Q9HBX3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SND1-IT1Q9HBX3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
SND1-IT1Q9HBX3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SND1-IT1Q9HBX3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SND1-IT1Q9HBX3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SND1-IT1Q9HBX3 AC104964.3-201ENST00000606115 2860 ntBASIC3.83□□□□□ -1.8
SND1-IT1Q9HBX3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SND1-IT1Q9HBX3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SND1-IT1Q9HBX3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SND1-IT1Q9HBX3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AC104623.2-202ENST00000623477 4002 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 USP40-202ENST00000409945 1946 ntTSL 2 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 TTC39DP-201ENST00000416781 1688 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AC003985.2-201ENST00000562268 1669 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 EEF1A1P14-201ENST00000421195 1376 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 RNA5SP279-201ENST00000365513 117 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AL353625.1-202ENST00000366273 571 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 MIR27A-201ENST00000385073 78 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 OR6C71P-201ENST00000432580 913 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 HMGN1P32-201ENST00000441744 256 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 RPS10P18-201ENST00000442662 495 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 LINC02210-201ENST00000444561 288 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 MTND6P32-201ENST00000457611 483 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 TFP1-201ENST00000460564 572 ntTSL 4 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 RN7SL267P-201ENST00000485107 261 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 TFP1-203ENST00000490470 561 ntTSL 4 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AC008629.2-201ENST00000503783 483 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AC110056.1-201ENST00000525759 911 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 NPIPB14P-203ENST00000532298 987 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 NMNAT1P5-201ENST00000559657 841 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 GARSP1-201ENST00000570895 719 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AC010487.1-201ENST00000594408 1172 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AC010615.3-201ENST00000597319 394 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 FAM72A-208ENST00000607379 1139 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 Z93930.3-201ENST00000607919 749 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 OR51C1P-201ENST00000608504 942 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 RFPL4AP6-201ENST00000616792 846 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AC006840.1-201ENST00000623069 542 ntBASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SND1-IT1Q9HBX3 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 LYARP1-201ENST00000436977 1501 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 MFSD8-239ENST00000641590 2479 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 MAPK10-338ENST00000641647 3362 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms