Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC020978.8-201ENST00000571975 3022 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 PPBPP2-201ENST00000513150 1362 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC009166.2-201ENST00000624410 2833 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 HSP90AA2P-201ENST00000530115 2196 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 RN7SKP171-201ENST00000364417 303 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 RNU6-481P-201ENST00000384194 107 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 SNORA70.8-201ENST00000384231 136 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 RN7SKP166-201ENST00000410812 305 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 FTLP17-201ENST00000432567 525 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 CCNB1IP1P2-201ENST00000432876 818 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 BX842559.2-201ENST00000451418 605 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 AP003385.3-201ENST00000472498 287 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 AC096576.1-201ENST00000489014 359 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 OR7E157P-201ENST00000494376 911 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 RN7SL569P-201ENST00000494652 288 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 RN7SL775P-201ENST00000498361 336 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 AC114324.2-202ENST00000503812 134 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 CCDC34P1-201ENST00000507441 517 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 MINOS1P4-201ENST00000515470 318 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 RNU6-889P-201ENST00000517189 103 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 IGHVII-60-1-201ENST00000519079 256 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 NAP1L1P1-201ENST00000524793 1063 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 OR5AK1P-201ENST00000524837 922 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 AP003033.2-201ENST00000528901 805 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 MIR4312-201ENST00000579909 76 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 EIF1P6-201ENST00000600054 334 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 OR7A1P-201ENST00000601206 970 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 AC091834.1-201ENST00000614543 472 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 AL158196.1-201ENST00000616786 434 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 MIR6823-201ENST00000622118 61 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 AC090983.1-201ENST00000623426 3897 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 EEF1A1P12-201ENST00000443590 1346 ntBASIC8.42□□□□□ -1.06
TRIM47Q96LD4 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
TRIM47Q96LD4 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM47Q96LD4 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM47Q96LD4 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM47Q96LD4 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
TRIM47Q96LD4 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM47Q96LD4 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM47Q96LD4 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM47Q96LD4 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM47Q96LD4 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM47Q96LD4 MT-RNR2-201ENST00000387347 1559 ntBASIC8.41□□□□□ -1.06
TRIM47Q96LD4 CD86-209ENST00000493101 1572 ntTSL 2 BASIC8.41□□□□□ -1.06
TRIM47Q96LD4 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC8.41□□□□□ -1.06
TRIM47Q96LD4 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC8.41□□□□□ -1.06
TRIM47Q96LD4 MTND4P14-201ENST00000435799 1354 ntBASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms