Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC33Q8N5R6 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC33Q8N5R6 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.43□□□□□ -1.38
CCDC33Q8N5R6 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
CCDC33Q8N5R6 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC33Q8N5R6 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 RNA5SP350-201ENST00000363298 111 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AL353692.2-201ENST00000407054 335 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 RN7SKP121-201ENST00000410842 305 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 RN7SKP161-201ENST00000411110 305 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 SLC20A1P1-201ENST00000413906 956 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 MTND6P32-201ENST00000457611 483 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 EIF2S2P5-201ENST00000457635 968 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 RPL34P33-201ENST00000486062 334 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AC092902.1-201ENST00000486999 259 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 HMGB1P3-201ENST00000502802 616 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 OR4A40P-201ENST00000533878 948 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AP001804.2-201ENST00000533932 910 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 LINC00556-201ENST00000569603 412 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AL139022.2-201ENST00000606934 443 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AL591167.1-201ENST00000607321 456 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AL096803.3-201ENST00000609032 532 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AL645927.2-201ENST00000618350 349 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AL512652.1-201ENST00000619006 500 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 HDAC1P2-201ENST00000453661 1398 ntBASIC6.42□□□□□ -1.38
CCDC33Q8N5R6 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 KARSP1-201ENST00000451871 1752 ntBASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 RNU1-59P-201ENST00000364829 162 ntBASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 AC104843.2-201ENST00000427666 297 ntBASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 AL022237.1-201ENST00000446663 358 ntBASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 AL627224.1-201ENST00000448334 444 ntBASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 MTND2P6-201ENST00000455337 1030 ntBASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 AL022319.1-201ENST00000458183 1167 ntBASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 OR5H7P-201ENST00000514084 930 ntBASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 AC093510.2-201ENST00000562820 896 ntBASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 AC100767.2-201ENST00000604840 693 ntBASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 AC005021.1-201ENST00000608730 355 ntBASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 U1.25-201ENST00000614085 162 ntBASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 U1.34-201ENST00000618578 162 ntBASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 U1.31-201ENST00000620022 160 ntBASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms