Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 RN7SKP59-201ENST00000410520 314 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 RNU6-77P-201ENST00000410554 91 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 RN7SKP188-201ENST00000410789 317 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 RNU2-22P-201ENST00000411266 212 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AL593851.1-201ENST00000426171 157 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AP001324.1-201ENST00000428553 399 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 USP9YP22-201ENST00000438971 294 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AC118758.1-202ENST00000454719 225 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AL133351.3-201ENST00000454998 193 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 PGBD4P1-201ENST00000473644 407 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AC116353.3-201ENST00000511215 249 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 MTCO1P49-201ENST00000523429 802 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AC007068.2-201ENST00000543168 395 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 RPL3P13-201ENST00000550415 216 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 MIR4666A-201ENST00000580160 79 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AC006539.2-201ENST00000601729 572 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AL589765.6-201ENST00000601909 549 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AC125494.2-201ENST00000602431 657 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AC107304.1-201ENST00000604229 296 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AC245297.2-201ENST00000610119 565 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 MIR4278-201ENST00000636094 69 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 AP003175.1-201ENST00000641383 6658 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 CASC19-284ENST00000642142 1868 ntBASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
NPAS4Q8IUM7 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AL353763.2-201ENST00000623489 1903 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 FAM3C2-201ENST00000312214 681 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 RNU6-707P-201ENST00000364647 95 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AL590635.1-201ENST00000406314 586 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 MTCO1P21-201ENST00000416634 589 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AC066692.1-201ENST00000421721 457 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 DPRXP1-201ENST00000426312 460 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms