Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 AL359837.1-201ENST00000381357 287 ntBASIC5.51□□□□□ -1.53
RIF1Q5UIP0 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 AC026402.1-201ENST00000513642 170 ntBASIC5.51□□□□□ -1.53
RIF1Q5UIP0 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 AC078899.1-201ENST00000521432 1185 ntBASIC5.51□□□□□ -1.53
RIF1Q5UIP0 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 AP004607.3-201ENST00000530354 3915 ntBASIC5.51□□□□□ -1.53
RIF1Q5UIP0 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 NIFKP3-201ENST00000417799 865 ntBASIC5.51□□□□□ -1.53
RIF1Q5UIP0 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 AC090114.3-201ENST00000479267 829 ntBASIC5.51□□□□□ -1.53
RIF1Q5UIP0 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 AC034105.4-201ENST00000568304 277 ntBASIC5.51□□□□□ -1.53
RIF1Q5UIP0 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RIF1Q5UIP0 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 AC122718.1-201ENST00000439448 744 ntBASIC5.5□□□□□ -1.53
RIF1Q5UIP0 MGAT2P1-201ENST00000449718 797 ntBASIC5.5□□□□□ -1.53
RIF1Q5UIP0 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 FAM133DP-201ENST00000464802 691 ntBASIC5.5□□□□□ -1.53
RIF1Q5UIP0 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 AL078599.1-201ENST00000402075 293 ntBASIC5.5□□□□□ -1.53
RIF1Q5UIP0 AL049693.1-201ENST00000402760 611 ntBASIC5.5□□□□□ -1.53
RIF1Q5UIP0 MYL6P5-201ENST00000412707 459 ntBASIC5.5□□□□□ -1.53
RIF1Q5UIP0 RPS6P23-201ENST00000413224 722 ntBASIC5.5□□□□□ -1.53
RIF1Q5UIP0 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 RSL24D1P6-201ENST00000426934 401 ntBASIC5.5□□□□□ -1.53
RIF1Q5UIP0 GAPDHP25-201ENST00000447061 1001 ntBASIC5.5□□□□□ -1.53
RIF1Q5UIP0 RPL7P16-201ENST00000479738 738 ntBASIC5.5□□□□□ -1.53
RIF1Q5UIP0 AC095057.1-201ENST00000507583 168 ntBASIC5.5□□□□□ -1.53
RIF1Q5UIP0 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 AC139365.2-201ENST00000517972 253 ntBASIC5.5□□□□□ -1.53
RIF1Q5UIP0 AC024255.1-201ENST00000614376 102 ntBASIC5.5□□□□□ -1.53
RIF1Q5UIP0 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 AL031123.3-201ENST00000623345 1837 ntBASIC5.5□□□□□ -1.53
RIF1Q5UIP0 USP48-203ENST00000374732 3037 ntTSL 2 BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RIF1Q5UIP0 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
RIF1Q5UIP0 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RIF1Q5UIP0 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.49□□□□□ -1.53
RIF1Q5UIP0 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RIF1Q5UIP0 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RIF1Q5UIP0 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
RIF1Q5UIP0 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RIF1Q5UIP0 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RIF1Q5UIP0 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RIF1Q5UIP0 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RIF1Q5UIP0 PRELID1P2-201ENST00000407805 396 ntBASIC5.49□□□□□ -1.53
RIF1Q5UIP0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RIF1Q5UIP0 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.49□□□□□ -1.53
RIF1Q5UIP0 RN7SL870P-201ENST00000460111 296 ntBASIC5.49□□□□□ -1.53
RIF1Q5UIP0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RIF1Q5UIP0 AL035690.1-201ENST00000490892 383 ntBASIC5.49□□□□□ -1.53
RIF1Q5UIP0 RPL23AP72-201ENST00000492447 435 ntBASIC5.49□□□□□ -1.53
RIF1Q5UIP0 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.49□□□□□ -1.53
RIF1Q5UIP0 EDDM3DP-201ENST00000554692 434 ntBASIC5.49□□□□□ -1.53
RIF1Q5UIP0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms