Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VARS2Q5ST30 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VARS2Q5ST30 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VARS2Q5ST30 CREM-212ENST00000374728 1933 ntTSL 5 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VARS2Q5ST30 CXorf57-201ENST00000372544 3607 ntTSL 2 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VARS2Q5ST30 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
VARS2Q5ST30 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
VARS2Q5ST30 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
VARS2Q5ST30 FAM205BP-202ENST00000399773 4009 ntBASIC8.71□□□□□ -1.01
VARS2Q5ST30 NLRP3P1-201ENST00000622303 1785 ntBASIC8.71□□□□□ -1.01
VARS2Q5ST30 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
VARS2Q5ST30 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
VARS2Q5ST30 AMBN-202ENST00000449493 1512 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
VARS2Q5ST30 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
VARS2Q5ST30 SMIM12-204ENST00000446026 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
VARS2Q5ST30 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
VARS2Q5ST30 NUTM1-203ENST00000537011 4102 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
VARS2Q5ST30 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
VARS2Q5ST30 AL512646.1-201ENST00000269395 1077 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 RN7SKP6-201ENST00000364795 319 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 RNA5SP355-201ENST00000365317 135 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
VARS2Q5ST30 EEF1AKMT1-202ENST00000382758 1042 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
VARS2Q5ST30 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
VARS2Q5ST30 RN7SKP119-201ENST00000410753 273 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC8.71□□□□□ -1.02
VARS2Q5ST30 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC8.71□□□□□ -1.02
VARS2Q5ST30 RPSAP32-201ENST00000432681 526 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC8.71□□□□□ -1.02
VARS2Q5ST30 AL161722.2-201ENST00000434731 981 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 TXNP1-201ENST00000441872 371 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 PA2G4P1-201ENST00000442248 1197 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 GAPDHP23-201ENST00000444823 993 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 AC104058.1-201ENST00000448028 297 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 AL929410.2-201ENST00000451170 189 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
VARS2Q5ST30 RPL23AP37-201ENST00000479658 549 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 AC023194.1-201ENST00000493084 308 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 MTCO1P29-201ENST00000496868 288 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 AC026784.1-201ENST00000507986 352 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
VARS2Q5ST30 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC8.71□□□□□ -1.02
VARS2Q5ST30 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC8.71□□□□□ -1.02
VARS2Q5ST30 HMGB1P19-201ENST00000517578 577 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC8.71□□□□□ -1.02
VARS2Q5ST30 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC8.71□□□□□ -1.02
VARS2Q5ST30 OR6M3P-201ENST00000531567 700 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 AC022882.1-201ENST00000532142 501 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC8.71□□□□□ -1.02
VARS2Q5ST30 AC026111.1-201ENST00000551090 1195 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 DNM1P34-202ENST00000567850 315 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC8.71□□□□□ -1.02
VARS2Q5ST30 RNF138P2-201ENST00000603490 592 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC8.71□□□□□ -1.02
VARS2Q5ST30 AC245028.3-201ENST00000618197 285 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 RPSAP68-201ENST00000625020 438 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
VARS2Q5ST30 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC8.71□□□□□ -1.02
VARS2Q5ST30 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC8.71□□□□□ -1.02
VARS2Q5ST30 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
VARS2Q5ST30 AC024610.2-203ENST00000636084 1348 ntTSL 5 BASIC8.71□□□□□ -1.02
VARS2Q5ST30 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
VARS2Q5ST30 XRCC6P4-201ENST00000518193 2067 ntBASIC8.71□□□□□ -1.02
VARS2Q5ST30 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
VARS2Q5ST30 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
VARS2Q5ST30 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
VARS2Q5ST30 HK1-203ENST00000360289 3961 ntTSL 5 BASIC8.71□□□□□ -1.02
VARS2Q5ST30 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC8.71□□□□□ -1.02
VARS2Q5ST30 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
VARS2Q5ST30 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
VARS2Q5ST30 LINC01616-201ENST00000561816 2280 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 AL512504.2-201ENST00000445455 1909 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 AC079777.1-201ENST00000623836 1953 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
VARS2Q5ST30 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 IKZF2-202ENST00000374319 2001 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
VARS2Q5ST30 AL139811.2-201ENST00000373465 1630 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
VARS2Q5ST30 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 AL049833.3-201ENST00000623920 3738 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 RNU6-1159P-201ENST00000362933 107 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 RNU6-770P-201ENST00000363929 105 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 VTRNA1-2-201ENST00000365241 89 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 RNU6-282P-201ENST00000365357 103 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 COQ3-202ENST00000369240 646 ntTSL 5 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
VARS2Q5ST30 SSX6-201ENST00000376932 562 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 AC133644.1-201ENST00000398171 937 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 AL161787.1-201ENST00000401543 174 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 RPL31P35-201ENST00000431058 377 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 RN7SL201P-201ENST00000482306 296 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 AC098583.2-201ENST00000504151 372 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms