Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN1BQ07699 AC026616.1-201ENST00000523157 525 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 AC084851.2-201ENST00000530377 364 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 HMGB1P42-201ENST00000532126 553 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.32□□□□□ -1.56
SCN1BQ07699 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.32□□□□□ -1.56
SCN1BQ07699 AL359219.2-201ENST00000555184 348 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN1BQ07699 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.32□□□□□ -1.56
SCN1BQ07699 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN1BQ07699 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN1BQ07699 WBP1LP11-201ENST00000586141 328 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN1BQ07699 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN1BQ07699 AC006115.2-201ENST00000596823 202 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN1BQ07699 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN1BQ07699 RPL23AP61-201ENST00000623642 466 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 AC068213.1-201ENST00000625124 226 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN1BQ07699 SAMMSON-209ENST00000641222 1100 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN1BQ07699 AC007342.7-201ENST00000624610 2337 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN1BQ07699 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN1BQ07699 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN1BQ07699 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
SCN1BQ07699 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
SCN1BQ07699 AC132825.1-201ENST00000463573 2247 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 AC097461.1-201ENST00000568928 2821 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN1BQ07699 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN1BQ07699 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 PARP4P2-201ENST00000446672 3326 ntBASIC5.31□□□□□ -1.56
SCN1BQ07699 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.31□□□□□ -1.56
SCN1BQ07699 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SCN1BQ07699 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SCN1BQ07699 RPL11P3-201ENST00000395256 523 ntBASIC5.31□□□□□ -1.56
SCN1BQ07699 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.31□□□□□ -1.56
SCN1BQ07699 BTF3P9-201ENST00000418784 283 ntBASIC5.31□□□□□ -1.56
SCN1BQ07699 GPN3P1-201ENST00000423883 535 ntBASIC5.31□□□□□ -1.56
SCN1BQ07699 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN1BQ07699 MTND2P2-201ENST00000434633 945 ntBASIC5.31□□□□□ -1.56
SCN1BQ07699 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN1BQ07699 CUBNP2-201ENST00000443534 1139 ntBASIC5.31□□□□□ -1.56
SCN1BQ07699 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.31□□□□□ -1.56
SCN1BQ07699 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN1BQ07699 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 RPL7AP10-201ENST00000481016 791 ntBASIC5.31□□□□□ -1.56
SCN1BQ07699 RN7SL502P-201ENST00000481857 290 ntBASIC5.31□□□□□ -1.56
SCN1BQ07699 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.31□□□□□ -1.56
SCN1BQ07699 AC018645.1-201ENST00000505003 109 ntBASIC5.31□□□□□ -1.56
SCN1BQ07699 AC016550.3-201ENST00000515706 767 ntBASIC5.31□□□□□ -1.56
SCN1BQ07699 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN1BQ07699 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN1BQ07699 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 AC037479.1-201ENST00000558361 625 ntBASIC5.31□□□□□ -1.56
SCN1BQ07699 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN1BQ07699 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN1BQ07699 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.31□□□□□ -1.56
SCN1BQ07699 AL163952.1-202ENST00000569625 600 ntBASIC5.31□□□□□ -1.56
SCN1BQ07699 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 MIR4660-201ENST00000583549 74 ntBASIC5.31□□□□□ -1.56
SCN1BQ07699 AC005332.4-201ENST00000592752 579 ntBASIC5.31□□□□□ -1.56
SCN1BQ07699 AC068020.1-201ENST00000594215 661 ntBASIC5.31□□□□□ -1.56
SCN1BQ07699 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN1BQ07699 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.31□□□□□ -1.56
SCN1BQ07699 AC130352.1-201ENST00000602979 661 ntBASIC5.31□□□□□ -1.56
SCN1BQ07699 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SCN1BQ07699 MIR7159-201ENST00000620587 66 ntBASIC5.31□□□□□ -1.56
SCN1BQ07699 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SCN1BQ07699 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
SCN1BQ07699 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SCN1BQ07699 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN1BQ07699 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
SCN1BQ07699 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCN1BQ07699 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SCN1BQ07699 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SCN1BQ07699 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN1BQ07699 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
SCN1BQ07699 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCN1BQ07699 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCN1BQ07699 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SCN1BQ07699 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SCN1BQ07699 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCN1BQ07699 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms