Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.5□□□□□ -1.21
CALD1Q05682 AC010487.1-201ENST00000594408 1172 ntBASIC7.5□□□□□ -1.21
CALD1Q05682 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.5□□□□□ -1.21
CALD1Q05682 AP001267.4-201ENST00000602598 545 ntBASIC7.5□□□□□ -1.21
CALD1Q05682 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.5□□□□□ -1.21
CALD1Q05682 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.5□□□□□ -1.21
CALD1Q05682 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.5□□□□□ -1.21
CALD1Q05682 MIR193BHG-214ENST00000641765 509 ntBASIC7.5□□□□□ -1.21
CALD1Q05682 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC7.5□□□□□ -1.21
CALD1Q05682 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CALD1Q05682 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
CALD1Q05682 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
CALD1Q05682 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CALD1Q05682 MAPK10-338ENST00000641647 3362 ntBASIC7.5□□□□□ -1.21
CALD1Q05682 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CALD1Q05682 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC7.49□□□□□ -1.21
CALD1Q05682 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
CALD1Q05682 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CALD1Q05682 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.49□□□□□ -1.21
CALD1Q05682 SAMM50P1-201ENST00000455403 1399 ntBASIC7.49□□□□□ -1.21
CALD1Q05682 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.49□□□□□ -1.21
CALD1Q05682 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CALD1Q05682 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CALD1Q05682 RNGTTP1-201ENST00000420965 728 ntBASIC7.49□□□□□ -1.21
CALD1Q05682 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC7.49□□□□□ -1.21
CALD1Q05682 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC7.49□□□□□ -1.21
CALD1Q05682 HMGB3P24-201ENST00000433260 622 ntBASIC7.49□□□□□ -1.21
CALD1Q05682 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC7.49□□□□□ -1.21
CALD1Q05682 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC7.49□□□□□ -1.21
CALD1Q05682 RPL12P24-201ENST00000474907 486 ntBASIC7.49□□□□□ -1.21
CALD1Q05682 RPL32P33-201ENST00000487023 394 ntBASIC7.49□□□□□ -1.21
CALD1Q05682 AC073610.1-201ENST00000489971 396 ntBASIC7.49□□□□□ -1.21
CALD1Q05682 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.49□□□□□ -1.21
CALD1Q05682 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CALD1Q05682 DCN-210ENST00000547568 823 ntTSL 3 BASIC7.49□□□□□ -1.21
CALD1Q05682 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC7.49□□□□□ -1.21
CALD1Q05682 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.49□□□□□ -1.21
CALD1Q05682 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.49□□□□□ -1.21
CALD1Q05682 AC092451.3-201ENST00000625067 1343 ntBASIC7.49□□□□□ -1.21
CALD1Q05682 MTCO1P46-201ENST00000451639 1491 ntBASIC7.49□□□□□ -1.21
CALD1Q05682 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
CALD1Q05682 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CALD1Q05682 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CALD1Q05682 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CALD1Q05682 AC068870.3-201ENST00000625077 2536 ntBASIC7.48□□□□□ -1.21
CALD1Q05682 LINC01963-201ENST00000562038 3148 ntBASIC7.48□□□□□ -1.21
CALD1Q05682 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC7.48□□□□□ -1.21
CALD1Q05682 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CALD1Q05682 AP002512.4-202ENST00000641599 4530 ntBASIC7.48□□□□□ -1.21
CALD1Q05682 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CALD1Q05682 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CALD1Q05682 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CALD1Q05682 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CALD1Q05682 RNA5SP91-201ENST00000390902 119 ntBASIC7.48□□□□□ -1.21
CALD1Q05682 HMGB1P20-201ENST00000402555 677 ntBASIC7.48□□□□□ -1.21
CALD1Q05682 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.48□□□□□ -1.21
CALD1Q05682 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.48□□□□□ -1.21
CALD1Q05682 BX119321.1-201ENST00000428912 797 ntBASIC7.48□□□□□ -1.21
CALD1Q05682 AC006484.1-201ENST00000435086 1884 ntBASIC7.48□□□□□ -1.21
CALD1Q05682 AL136455.1-201ENST00000441083 1240 ntBASIC7.48□□□□□ -1.21
CALD1Q05682 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.48□□□□□ -1.21
CALD1Q05682 RPL31P15-201ENST00000449770 338 ntBASIC7.48□□□□□ -1.21
CALD1Q05682 NXT1P1-201ENST00000458481 316 ntBASIC7.48□□□□□ -1.21
CALD1Q05682 RPSAP37-201ENST00000470913 821 ntBASIC7.48□□□□□ -1.21
CALD1Q05682 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CALD1Q05682 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC7.48□□□□□ -1.21
CALD1Q05682 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC7.48□□□□□ -1.21
CALD1Q05682 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC7.48□□□□□ -1.21
CALD1Q05682 AC008521.2-201ENST00000591021 259 ntBASIC7.48□□□□□ -1.21
CALD1Q05682 AC063977.5-201ENST00000601044 974 ntBASIC7.48□□□□□ -1.21
CALD1Q05682 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC7.48□□□□□ -1.21
CALD1Q05682 RNA5SP439-201ENST00000617595 124 ntBASIC7.48□□□□□ -1.21
CALD1Q05682 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CALD1Q05682 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC7.48□□□□□ -1.21
CALD1Q05682 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.48□□□□□ -1.21
CALD1Q05682 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC7.47□□□□□ -1.21
CALD1Q05682 AC099654.3-201ENST00000447087 1546 ntBASIC7.47□□□□□ -1.21
CALD1Q05682 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CALD1Q05682 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CALD1Q05682 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CALD1Q05682 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.47□□□□□ -1.21
CALD1Q05682 RNA5SP394-201ENST00000364216 119 ntBASIC7.47□□□□□ -1.21
CALD1Q05682 MIR130A-201ENST00000385274 89 ntBASIC7.47□□□□□ -1.21
CALD1Q05682 AL031985.1-201ENST00000392713 418 ntBASIC7.47□□□□□ -1.21
CALD1Q05682 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC7.47□□□□□ -1.21
CALD1Q05682 CDY17P-201ENST00000414121 1282 ntBASIC7.47□□□□□ -1.21
CALD1Q05682 GAPDHP48-201ENST00000436626 961 ntBASIC7.47□□□□□ -1.21
CALD1Q05682 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.47□□□□□ -1.21
CALD1Q05682 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC7.47□□□□□ -1.21
CALD1Q05682 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC7.47□□□□□ -1.21
CALD1Q05682 RPS23P6-201ENST00000466136 431 ntBASIC7.47□□□□□ -1.21
CALD1Q05682 UBFD1P1-201ENST00000473259 814 ntBASIC7.47□□□□□ -1.21
CALD1Q05682 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CALD1Q05682 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.47□□□□□ -1.21
CALD1Q05682 AC111000.5-201ENST00000506559 1178 ntBASIC7.47□□□□□ -1.21
CALD1Q05682 UGT2A3P7-201ENST00000510485 734 ntBASIC7.47□□□□□ -1.21
CALD1Q05682 RNU6-615P-201ENST00000516065 106 ntBASIC7.47□□□□□ -1.21
CALD1Q05682 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.47□□□□□ -1.21
CALD1Q05682 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.47□□□□□ -1.21
CALD1Q05682 DPPA2P4-201ENST00000563717 878 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms