Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.09□□□□□ -1.44
CASQ1P31415 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.09□□□□□ -1.44
CASQ1P31415 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CASQ1P31415 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
CASQ1P31415 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CASQ1P31415 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CASQ1P31415 RNU1-134P-201ENST00000362935 165 ntBASIC6.08□□□□□ -1.44
CASQ1P31415 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CASQ1P31415 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.08□□□□□ -1.44
CASQ1P31415 RNF10P1-201ENST00000418589 369 ntBASIC6.08□□□□□ -1.44
CASQ1P31415 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.08□□□□□ -1.44
CASQ1P31415 AC012512.1-201ENST00000446594 718 ntBASIC6.08□□□□□ -1.44
CASQ1P31415 AC023245.1-201ENST00000468501 517 ntBASIC6.08□□□□□ -1.44
CASQ1P31415 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CASQ1P31415 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.08□□□□□ -1.44
CASQ1P31415 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.08□□□□□ -1.44
CASQ1P31415 AC093890.1-201ENST00000502554 540 ntBASIC6.08□□□□□ -1.44
CASQ1P31415 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.08□□□□□ -1.44
CASQ1P31415 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.08□□□□□ -1.44
CASQ1P31415 NMNAT1P5-201ENST00000559657 841 ntBASIC6.08□□□□□ -1.44
CASQ1P31415 AC018552.1-201ENST00000562099 811 ntBASIC6.08□□□□□ -1.44
CASQ1P31415 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CASQ1P31415 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.08□□□□□ -1.44
CASQ1P31415 AP005136.2-201ENST00000583253 1049 ntBASIC6.08□□□□□ -1.44
CASQ1P31415 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.08□□□□□ -1.44
CASQ1P31415 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.08□□□□□ -1.44
CASQ1P31415 AL139041.1-201ENST00000605480 610 ntBASIC6.08□□□□□ -1.44
CASQ1P31415 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC6.08□□□□□ -1.44
CASQ1P31415 AC068726.1-201ENST00000610993 341 ntBASIC6.08□□□□□ -1.44
CASQ1P31415 MIR8082-201ENST00000612488 81 ntBASIC6.08□□□□□ -1.44
CASQ1P31415 AL021918.2-201ENST00000613415 194 ntBASIC6.08□□□□□ -1.44
CASQ1P31415 AL139099.4-201ENST00000614802 114 ntBASIC6.08□□□□□ -1.44
CASQ1P31415 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.08□□□□□ -1.44
CASQ1P31415 AC018558.4-201ENST00000622153 281 ntBASIC6.08□□□□□ -1.44
CASQ1P31415 MIR6503-201ENST00000622884 86 ntBASIC6.08□□□□□ -1.44
CASQ1P31415 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.08□□□□□ -1.44
CASQ1P31415 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.08□□□□□ -1.44
CASQ1P31415 AC068870.1-201ENST00000563737 2455 ntBASIC6.08□□□□□ -1.44
CASQ1P31415 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CASQ1P31415 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CASQ1P31415 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CASQ1P31415 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CASQ1P31415 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.08□□□□□ -1.44
CASQ1P31415 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CASQ1P31415 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CASQ1P31415 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CASQ1P31415 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.07□□□□□ -1.44
CASQ1P31415 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CASQ1P31415 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CASQ1P31415 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CASQ1P31415 RNA5SP77-201ENST00000365394 120 ntBASIC6.07□□□□□ -1.44
CASQ1P31415 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CASQ1P31415 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CASQ1P31415 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.07□□□□□ -1.44
CASQ1P31415 MRPL32P1-201ENST00000406301 247 ntBASIC6.07□□□□□ -1.44
CASQ1P31415 RN7SKP97-201ENST00000410966 333 ntBASIC6.07□□□□□ -1.44
CASQ1P31415 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.07□□□□□ -1.44
CASQ1P31415 THEM7P-201ENST00000419556 672 ntBASIC6.07□□□□□ -1.44
CASQ1P31415 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.07□□□□□ -1.44
CASQ1P31415 AC013268.2-201ENST00000420753 337 ntBASIC6.07□□□□□ -1.44
CASQ1P31415 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.07□□□□□ -1.44
CASQ1P31415 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.07□□□□□ -1.44
CASQ1P31415 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CASQ1P31415 OR52E3P-201ENST00000452083 936 ntBASIC6.07□□□□□ -1.44
CASQ1P31415 RPS23P2-201ENST00000463671 415 ntBASIC6.07□□□□□ -1.44
CASQ1P31415 AC098583.1-201ENST00000480875 255 ntBASIC6.07□□□□□ -1.44
CASQ1P31415 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.07□□□□□ -1.44
CASQ1P31415 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.07□□□□□ -1.44
CASQ1P31415 SNX18P25-201ENST00000510539 758 ntBASIC6.07□□□□□ -1.44
CASQ1P31415 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.07□□□□□ -1.44
CASQ1P31415 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.07□□□□□ -1.44
CASQ1P31415 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.07□□□□□ -1.44
CASQ1P31415 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.07□□□□□ -1.44
CASQ1P31415 EIF4A2P5-201ENST00000529914 499 ntBASIC6.07□□□□□ -1.44
CASQ1P31415 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CASQ1P31415 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CASQ1P31415 MRPS21P8-201ENST00000569196 235 ntBASIC6.07□□□□□ -1.44
CASQ1P31415 AC025283.1-201ENST00000572039 734 ntBASIC6.07□□□□□ -1.44
CASQ1P31415 SMIM12P1-201ENST00000603004 274 ntBASIC6.07□□□□□ -1.44
CASQ1P31415 RPSAP75-201ENST00000605848 301 ntBASIC6.07□□□□□ -1.44
CASQ1P31415 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
CASQ1P31415 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.07□□□□□ -1.44
CASQ1P31415 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CASQ1P31415 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CASQ1P31415 CR382285.2-201ENST00000624662 1495 ntBASIC6.07□□□□□ -1.44
CASQ1P31415 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
CASQ1P31415 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CASQ1P31415 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CASQ1P31415 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CASQ1P31415 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.06□□□□□ -1.44
CASQ1P31415 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CASQ1P31415 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CASQ1P31415 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CASQ1P31415 SELENOWP1-201ENST00000322792 252 ntBASIC6.06□□□□□ -1.44
CASQ1P31415 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.06□□□□□ -1.44
CASQ1P31415 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CASQ1P31415 RNU4-44P-201ENST00000363050 141 ntBASIC6.06□□□□□ -1.44
CASQ1P31415 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CASQ1P31415 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CASQ1P31415 RNA5SP241-201ENST00000391326 114 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms