Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC12P31275 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
HOXC12P31275 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC12P31275 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXC12P31275 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXC12P31275 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXC12P31275 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
HOXC12P31275 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXC12P31275 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC12P31275 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXC12P31275 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC12P31275 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC12P31275 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC12P31275 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 AC127070.3-201ENST00000503695 3263 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC12P31275 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC12P31275 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC12P31275 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXC12P31275 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC12P31275 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 KARSP3-201ENST00000571212 1504 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC12P31275 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC12P31275 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 OR56B2P-201ENST00000317102 954 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 RN7SKP118-201ENST00000364331 330 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 RNU4-7P-201ENST00000364758 141 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 MIR621-201ENST00000384919 96 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 FAUP2-201ENST00000394301 401 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 RPL24P7-201ENST00000399435 453 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 RPS27AP11-201ENST00000402798 447 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXC12P31275 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXC12P31275 AC009784.1-201ENST00000426484 460 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 DEFA9P-201ENST00000433042 285 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC12P31275 AL731892.1-201ENST00000437364 1192 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXC12P31275 RPL29P7-201ENST00000440227 457 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 AC079781.1-201ENST00000441505 394 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXC12P31275 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXC12P31275 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXC12P31275 AL929288.2-201ENST00000446368 407 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 GOT2P2-201ENST00000450663 1251 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXC12P31275 AC096922.1-201ENST00000461635 651 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXC12P31275 AC021205.1-201ENST00000468797 348 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 RPL30P6-201ENST00000475925 342 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.37□□□□□ -1.39
HOXC12P31275 AC079594.1-201ENST00000489757 331 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 AL117692.1-201ENST00000494283 713 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 DSTNP2-201ENST00000504533 515 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 AC008967.1-201ENST00000504843 163 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 NACAP5-201ENST00000509863 636 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 MTCO2P32-201ENST00000514865 403 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 AC096661.1-201ENST00000515870 822 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXC12P31275 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC12P31275 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXC12P31275 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXC12P31275 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC12P31275 AC124293.1-201ENST00000530034 493 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 OR7E161P-201ENST00000533722 967 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 AC092747.2-201ENST00000545069 983 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC12P31275 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXC12P31275 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXC12P31275 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXC12P31275 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXC12P31275 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXC12P31275 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.37□□□□□ -1.39
HOXC12P31275 ISCA1P3-201ENST00000577104 373 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 AC015801.1-201ENST00000585651 153 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXC12P31275 AF131215.7-201ENST00000602443 707 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 AC004890.3-201ENST00000605566 1095 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXC12P31275 AC092653.1-201ENST00000608509 531 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.37□□□□□ -1.39
HOXC12P31275 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC12P31275 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXC12P31275 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC12P31275 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms