Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC074386.1-201ENST00000476560 767 ntBASIC8.51□□□□□ -1.05
RNF40O75150 TAF8-207ENST00000482432 556 ntTSL 2 BASIC8.51□□□□□ -1.05
RNF40O75150 RPS15AP36-201ENST00000492022 382 ntBASIC8.51□□□□□ -1.05
RNF40O75150 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC8.51□□□□□ -1.05
RNF40O75150 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 GAPDHP38-201ENST00000503632 1002 ntBASIC8.51□□□□□ -1.05
RNF40O75150 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC8.51□□□□□ -1.05
RNF40O75150 NMNAT1P4-201ENST00000505598 840 ntBASIC8.51□□□□□ -1.05
RNF40O75150 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC8.51□□□□□ -1.05
RNF40O75150 MEPE-206ENST00000511670 550 ntTSL 4 BASIC8.51□□□□□ -1.05
RNF40O75150 RNU6-1281P-201ENST00000516223 105 ntBASIC8.51□□□□□ -1.05
RNF40O75150 RN7SKP31-201ENST00000516354 278 ntBASIC8.51□□□□□ -1.05
RNF40O75150 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC8.51□□□□□ -1.05
RNF40O75150 AC087280.1-201ENST00000530632 1003 ntBASIC8.51□□□□□ -1.05
RNF40O75150 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC8.51□□□□□ -1.05
RNF40O75150 HIF1AP1-201ENST00000553642 175 ntBASIC8.51□□□□□ -1.05
RNF40O75150 OR4F28P-201ENST00000559128 938 ntBASIC8.51□□□□□ -1.05
RNF40O75150 AC110588.1-201ENST00000559699 137 ntBASIC8.51□□□□□ -1.05
RNF40O75150 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC8.51□□□□□ -1.05
RNF40O75150 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC8.51□□□□□ -1.05
RNF40O75150 OR4F8P-201ENST00000589943 937 ntBASIC8.51□□□□□ -1.05
RNF40O75150 AL669831.4-202ENST00000590817 238 ntBASIC8.51□□□□□ -1.05
RNF40O75150 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC8.51□□□□□ -1.05
RNF40O75150 AC011453.2-201ENST00000603737 729 ntBASIC8.51□□□□□ -1.05
RNF40O75150 SNRPGP17-201ENST00000603780 214 ntBASIC8.51□□□□□ -1.05
RNF40O75150 RMST_3.1-201ENST00000611651 109 ntBASIC8.51□□□□□ -1.05
RNF40O75150 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC8.51□□□□□ -1.05
RNF40O75150 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC8.51□□□□□ -1.05
RNF40O75150 AC090527.3-201ENST00000619041 548 ntBASIC8.51□□□□□ -1.05
RNF40O75150 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
RNF40O75150 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 AL031651.1-201ENST00000615357 1438 ntBASIC8.51□□□□□ -1.05
RNF40O75150 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 AL136298.2-201ENST00000556497 1570 ntBASIC8.51□□□□□ -1.05
RNF40O75150 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
RNF40O75150 FBXO36-201ENST00000283946 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.51□□□□□ -1.05
RNF40O75150 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.51□□□□□ -1.05
RNF40O75150 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 BCL9P1-201ENST00000506012 2561 ntBASIC8.51□□□□□ -1.05
RNF40O75150 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 AC100871.1-201ENST00000507871 1456 ntBASIC8.51□□□□□ -1.05
RNF40O75150 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.5□□□□□ -1.05
RNF40O75150 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC8.5□□□□□ -1.05
RNF40O75150 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC8.5□□□□□ -1.05
RNF40O75150 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
RNF40O75150 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC8.5□□□□□ -1.05
RNF40O75150 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
RNF40O75150 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 Y_RNA.1-201ENST00000352915 104 ntBASIC8.5□□□□□ -1.05
RNF40O75150 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
RNF40O75150 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC8.5□□□□□ -1.05
RNF40O75150 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
RNF40O75150 RNA5SP256-201ENST00000390978 113 ntBASIC8.5□□□□□ -1.05
RNF40O75150 RPS3AP36-201ENST00000398190 775 ntBASIC8.5□□□□□ -1.05
RNF40O75150 OR4F7P-201ENST00000402444 931 ntBASIC8.5□□□□□ -1.05
RNF40O75150 OR4F1P-201ENST00000405102 938 ntBASIC8.5□□□□□ -1.05
RNF40O75150 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC8.5□□□□□ -1.05
RNF40O75150 Y_RNA.598-201ENST00000410480 95 ntBASIC8.5□□□□□ -1.05
RNF40O75150 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC8.5□□□□□ -1.05
RNF40O75150 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC8.5□□□□□ -1.05
RNF40O75150 OR4F2P-201ENST00000424047 938 ntBASIC8.5□□□□□ -1.05
RNF40O75150 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC8.5□□□□□ -1.05
RNF40O75150 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC8.5□□□□□ -1.05
RNF40O75150 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC8.5□□□□□ -1.05
RNF40O75150 VDAC1P6-201ENST00000430062 855 ntBASIC8.5□□□□□ -1.05
RNF40O75150 FTH1P10-202ENST00000430907 550 ntBASIC8.5□□□□□ -1.05
RNF40O75150 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
RNF40O75150 ASS1P5-201ENST00000435496 1239 ntBASIC8.5□□□□□ -1.05
RNF40O75150 ATP8A2P2-201ENST00000437678 1568 ntBASIC8.5□□□□□ -1.05
RNF40O75150 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 MRPL50P4-201ENST00000446432 475 ntBASIC8.5□□□□□ -1.05
RNF40O75150 RN7SL870P-201ENST00000460111 296 ntBASIC8.5□□□□□ -1.05
RNF40O75150 RPSAP39-201ENST00000467439 883 ntBASIC8.5□□□□□ -1.05
RNF40O75150 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC8.5□□□□□ -1.05
RNF40O75150 GAPDHP39-201ENST00000481866 979 ntBASIC8.5□□□□□ -1.05
RNF40O75150 AL355076.1-201ENST00000484315 270 ntBASIC8.5□□□□□ -1.05
RNF40O75150 SNX5P1-201ENST00000505757 1041 ntBASIC8.5□□□□□ -1.05
RNF40O75150 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC8.5□□□□□ -1.05
RNF40O75150 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC8.5□□□□□ -1.05
RNF40O75150 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC8.5□□□□□ -1.05
RNF40O75150 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC8.5□□□□□ -1.05
RNF40O75150 RN7SKP116-201ENST00000516902 319 ntBASIC8.5□□□□□ -1.05
RNF40O75150 AC109635.6-201ENST00000525487 1113 ntBASIC8.5□□□□□ -1.05
RNF40O75150 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms