Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SCN2BO60939 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SCN2BO60939 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN2BO60939 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SCN2BO60939 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SCN2BO60939 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SCN2BO60939 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SCN2BO60939 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SCN2BO60939 RNA5SP326-201ENST00000363209 110 ntBASIC5.4□□□□□ -1.54
SCN2BO60939 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SCN2BO60939 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN2BO60939 AL445213.1-201ENST00000412589 747 ntBASIC5.4□□□□□ -1.54
SCN2BO60939 MRPL53P1-201ENST00000414323 319 ntBASIC5.4□□□□□ -1.54
SCN2BO60939 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.4□□□□□ -1.54
SCN2BO60939 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.4□□□□□ -1.54
SCN2BO60939 RNF10P1-201ENST00000418589 369 ntBASIC5.4□□□□□ -1.54
SCN2BO60939 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN2BO60939 MED28P3-201ENST00000444288 531 ntBASIC5.4□□□□□ -1.54
SCN2BO60939 AC023271.1-201ENST00000445936 1090 ntBASIC5.4□□□□□ -1.54
SCN2BO60939 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.4□□□□□ -1.54
SCN2BO60939 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SCN2BO60939 AC023194.2-201ENST00000465398 406 ntBASIC5.4□□□□□ -1.54
SCN2BO60939 RBBP4P1-201ENST00000502424 1276 ntBASIC5.4□□□□□ -1.54
SCN2BO60939 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.4□□□□□ -1.54
SCN2BO60939 AC074255.1-201ENST00000511259 501 ntBASIC5.4□□□□□ -1.54
SCN2BO60939 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN2BO60939 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.4□□□□□ -1.54
SCN2BO60939 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN2BO60939 AC002310.3-201ENST00000569728 723 ntBASIC5.4□□□□□ -1.54
SCN2BO60939 AC009237.13-201ENST00000603193 276 ntBASIC5.4□□□□□ -1.54
SCN2BO60939 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SCN2BO60939 MIR6780B-201ENST00000610307 79 ntBASIC5.4□□□□□ -1.54
SCN2BO60939 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SCN2BO60939 AC073592.6-201ENST00000624271 415 ntBASIC5.4□□□□□ -1.54
SCN2BO60939 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.4□□□□□ -1.54
SCN2BO60939 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
SCN2BO60939 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SCN2BO60939 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SCN2BO60939 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SCN2BO60939 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SCN2BO60939 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.4□□□□□ -1.55
SCN2BO60939 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.4□□□□□ -1.55
SCN2BO60939 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SCN2BO60939 AC093225.1-201ENST00000506867 1408 ntBASIC5.4□□□□□ -1.55
SCN2BO60939 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN2BO60939 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN2BO60939 AC016745.2-201ENST00000608834 3443 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 AC109446.4-201ENST00000623235 2755 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 ADAM24P-201ENST00000398655 2101 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN2BO60939 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN2BO60939 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN2BO60939 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN2BO60939 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.39□□□□□ -1.55
SCN2BO60939 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SCN2BO60939 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.39□□□□□ -1.55
SCN2BO60939 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN2BO60939 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN2BO60939 RNU1-150P-201ENST00000362491 162 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 RNU1-65P-201ENST00000363919 148 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN2BO60939 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN2BO60939 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SCN2BO60939 AL136231.1-201ENST00000429407 730 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN2BO60939 MTND2P40-201ENST00000436718 841 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 ATP5LP2-201ENST00000440646 311 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SCN2BO60939 AC005165.2-201ENST00000466070 380 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 RN7SL57P-201ENST00000493687 290 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 AL117692.1-201ENST00000494283 713 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN2BO60939 GAPDHP71-201ENST00000511530 1003 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 RN7SKP253-201ENST00000516424 309 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 SEPT10P1-201ENST00000517342 1162 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 AC011853.1-201ENST00000518911 454 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 PCNAP4-201ENST00000532690 730 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 AC007956.1-201ENST00000555623 542 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN2BO60939 MIR6133-201ENST00000617057 108 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SCN2BO60939 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN2BO60939 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN2BO60939 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SCN2BO60939 LINC02019-201ENST00000608605 2060 ntBASIC5.39□□□□□ -1.55
SCN2BO60939 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SCN2BO60939 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN2BO60939 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN2BO60939 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.39□□□□□ -1.55
SCN2BO60939 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
SCN2BO60939 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SCN2BO60939 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SCN2BO60939 CASC19-238ENST00000641523 1558 ntBASIC5.38□□□□□ -1.55
SCN2BO60939 AL022311.1-201ENST00000623726 19416 ntBASIC5.38□□□□□ -1.55
SCN2BO60939 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN2BO60939 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN2BO60939 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SCN2BO60939 AC007938.2-201ENST00000604666 2634 ntBASIC5.38□□□□□ -1.55
SCN2BO60939 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN2BO60939 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms