Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.73□□□□□ -1.65
HDHD3Q9BSH5 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HDHD3Q9BSH5 AL512356.3-201ENST00000623005 461 ntBASIC4.73□□□□□ -1.65
HDHD3Q9BSH5 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HDHD3Q9BSH5 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HDHD3Q9BSH5 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HDHD3Q9BSH5 AC079097.1-201ENST00000512187 1399 ntBASIC4.73□□□□□ -1.65
HDHD3Q9BSH5 AL034546.1-201ENST00000623740 3693 ntBASIC4.73□□□□□ -1.65
HDHD3Q9BSH5 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.73□□□□□ -1.65
HDHD3Q9BSH5 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HDHD3Q9BSH5 AL031595.2-201ENST00000624215 19071 ntBASIC4.73□□□□□ -1.65
HDHD3Q9BSH5 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HDHD3Q9BSH5 MAPK10-328ENST00000641553 4009 ntBASIC4.73□□□□□ -1.65
HDHD3Q9BSH5 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HDHD3Q9BSH5 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 GAPDHP24-201ENST00000328713 983 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 BX284632.2-201ENST00000421091 399 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AL512605.1-202ENST00000441919 381 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AL359955.2-201ENST00000445380 353 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 CFL1P4-201ENST00000451536 498 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 NXT1P1-201ENST00000458481 316 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AC023194.2-201ENST00000465398 406 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 RPSAP37-201ENST00000470913 821 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AC009120.1-201ENST00000493458 473 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 DUTP7-201ENST00000507982 486 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AC074255.1-201ENST00000511259 501 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 SCARNA18.1-201ENST00000516330 83 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 SCARNA6.1-201ENST00000516989 238 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 SEPT10P1-201ENST00000517342 1162 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AP003396.4-201ENST00000527574 265 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AC079064.1-201ENST00000528365 362 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 TRIM51DP-201ENST00000529746 596 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 OR5AM1P-201ENST00000532136 1032 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AL356801.1-201ENST00000559320 294 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AC002519.2-203ENST00000567043 837 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AC027216.1-201ENST00000577726 685 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AL583832.1-201ENST00000603227 784 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 FAM27E4-201ENST00000605259 342 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 MIR6793-201ENST00000612376 63 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AC090607.5-201ENST00000615692 224 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 MIR6813-201ENST00000621638 56 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 GTF2IP4-201ENST00000453092 2054 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 AC093671.1-201ENST00000624981 2929 ntBASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HDHD3Q9BSH5 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HDHD3Q9BSH5 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 AC090220.1-201ENST00000593078 1699 ntBASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 CASC19-238ENST00000641523 1558 ntBASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 AC092681.1-201ENST00000297369 291 ntBASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 RN7SKP69-201ENST00000365390 305 ntBASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 RN7SKP86-201ENST00000410454 332 ntBASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 AL121578.1-201ENST00000428051 892 ntBASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 BX323845.3-201ENST00000428215 527 ntBASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 AC073465.2-201ENST00000440938 498 ntBASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 AL136455.1-201ENST00000441083 1240 ntBASIC4.71□□□□□ -1.66
HDHD3Q9BSH5 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms