Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC8.51□□□□□ -1.05
LRCH3Q96II8 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC8.51□□□□□ -1.05
LRCH3Q96II8 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC8.51□□□□□ -1.05
LRCH3Q96II8 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC8.51□□□□□ -1.05
LRCH3Q96II8 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC8.51□□□□□ -1.05
LRCH3Q96II8 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC8.51□□□□□ -1.05
LRCH3Q96II8 AC009779.4-201ENST00000554248 611 ntBASIC8.51□□□□□ -1.05
LRCH3Q96II8 AL591767.2-201ENST00000554984 173 ntBASIC8.51□□□□□ -1.05
LRCH3Q96II8 AL390334.1-201ENST00000556395 450 ntBASIC8.51□□□□□ -1.05
LRCH3Q96II8 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC8.51□□□□□ -1.05
LRCH3Q96II8 AC010542.1-201ENST00000568430 555 ntTSL 4 BASIC8.51□□□□□ -1.05
LRCH3Q96II8 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC8.51□□□□□ -1.05
LRCH3Q96II8 MIR4271-201ENST00000582451 67 ntBASIC8.51□□□□□ -1.05
LRCH3Q96II8 GMFG-204ENST00000595636 487 ntTSL 2 BASIC8.51□□□□□ -1.05
LRCH3Q96II8 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC8.51□□□□□ -1.05
LRCH3Q96II8 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC8.51□□□□□ -1.05
LRCH3Q96II8 AC012640.3-201ENST00000607847 430 ntBASIC8.51□□□□□ -1.05
LRCH3Q96II8 AC092807.2-201ENST00000609367 243 ntBASIC8.51□□□□□ -1.05
LRCH3Q96II8 AL133351.5-201ENST00000612789 106 ntBASIC8.51□□□□□ -1.05
LRCH3Q96II8 MIR7109-201ENST00000613748 65 ntBASIC8.51□□□□□ -1.05
LRCH3Q96II8 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC8.51□□□□□ -1.05
LRCH3Q96II8 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
LRCH3Q96II8 ZNF840P-201ENST00000504759 1996 ntBASIC8.51□□□□□ -1.05
LRCH3Q96II8 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LRCH3Q96II8 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC8.51□□□□□ -1.05
LRCH3Q96II8 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
LRCH3Q96II8 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LRCH3Q96II8 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC8.51□□□□□ -1.05
LRCH3Q96II8 KIF23-201ENST00000260363 3713 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
LRCH3Q96II8 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC8.51□□□□□ -1.05
LRCH3Q96II8 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LRCH3Q96II8 WDR44-203ENST00000371825 4029 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
LRCH3Q96II8 SLAMF7-211ENST00000621377 2608 ntTSL 2 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 AC132825.1-201ENST00000463573 2247 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 OSBPL6-202ENST00000315022 2999 ntTSL 2 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 MLANA-203ENST00000381477 2415 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 OR52B1P-201ENST00000316506 909 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 GLYAT-202ENST00000344743 1735 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 RNU6-451P-201ENST00000362921 107 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 RNA5SP396-201ENST00000364834 120 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 RNA5SP79-201ENST00000365193 109 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 MIR146B-201ENST00000365699 73 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 LINC01291-201ENST00000377469 3662 ntTSL 2 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 Y_RNA.384-201ENST00000383909 102 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 SNORA51.12-201ENST00000384448 134 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 RNA5SP177-201ENST00000410122 107 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 AC244157.1-201ENST00000415642 163 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 EIF1P3-201ENST00000423841 334 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 GTF2IP20-201ENST00000431663 360 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 RN7SL655P-201ENST00000486087 298 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 AC006299.1-203ENST00000499625 2029 ntTSL 5 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 KCTD9P5-201ENST00000504141 1170 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 MIR3137-201ENST00000577367 75 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 AC023513.1-201ENST00000604396 691 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 U2.22-201ENST00000636441 106 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 AC078795.1-201ENST00000602342 3143 ntBASIC8.5□□□□□ -1.05
LRCH3Q96II8 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC8.5□□□□□ -1.05
LRCH3Q96II8 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LRCH3Q96II8 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LRCH3Q96II8 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 196.7 ms