Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AC097063.1-201ENST00000426714 1797 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 RPS7P8-201ENST00000418311 581 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 NMD3P2-201ENST00000421815 761 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AC017019.1-201ENST00000426129 261 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 PSMD10P2-201ENST00000432890 672 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AL022324.2-201ENST00000434827 780 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AL645936.1-201ENST00000441979 518 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AC092601.1-201ENST00000444526 383 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 PPIAP32-201ENST00000449940 472 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 MORF4L1P4-201ENST00000450245 976 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AC016027.4-201ENST00000450866 277 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 FRG2FP-204ENST00000453982 852 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AC104629.2-201ENST00000468627 598 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 RPL38P3-201ENST00000484463 213 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 RNU6-362P-201ENST00000516736 90 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 OR56A7P-201ENST00000524865 941 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AC126615.2-201ENST00000553003 515 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AC090826.1-203ENST00000569235 490 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 RPSAP75-201ENST00000605848 301 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AC096861.1-201ENST00000616652 240 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AC009032.1-201ENST00000617574 431 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AC007204.1-201ENST00000621794 555 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AC089999.3-201ENST00000622440 577 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AC105105.5-201ENST00000622635 1294 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 AC079776.5-201ENST00000641920 211 ntBASIC5.68□□□□□ -1.5
VPS33AQ96AX1 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS33AQ96AX1 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 SNORA64.3-201ENST00000365647 134 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AL136116.2-201ENST00000404020 785 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AL445528.1-201ENST00000426330 420 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 MGAT2P2-201ENST00000427194 797 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC010086.1-201ENST00000437359 1052 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC096632.2-201ENST00000438139 1239 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 EIF2S2P4-201ENST00000461070 984 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 PFN1P6-201ENST00000476786 399 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 LARP7P4-201ENST00000481075 878 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 RN7SL502P-201ENST00000481857 290 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 PDCL3P4-201ENST00000489621 720 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC111000.6-201ENST00000514471 709 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 RNU6-491P-201ENST00000516099 110 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC020937.1-201ENST00000519677 1013 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC026616.1-201ENST00000523157 525 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 OR4V1P-201ENST00000525394 1140 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC074029.2-201ENST00000551045 634 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC005632.2-201ENST00000564271 828 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AL163952.1-202ENST00000569625 600 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 BX322635.1-201ENST00000605804 496 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 AC004241.3-201ENST00000611728 517 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 MIR6883-201ENST00000614952 78 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms