Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 EEF1A1P13-201ENST00000503537 1389 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 RN7SKP208-201ENST00000365474 361 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC073621.2-201ENST00000381380 1024 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 HNRNPCP2-201ENST00000399515 881 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 CALM2P3-201ENST00000400429 449 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 COX6A1P3-201ENST00000404167 293 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AL590290.1-201ENST00000405336 380 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 SNORA73.3-201ENST00000410213 189 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 RPS3AP3-201ENST00000411933 242 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AL139128.1-201ENST00000413921 941 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 RBM22P7-201ENST00000421321 280 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC092066.1-201ENST00000425131 317 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 BX890604.2-201ENST00000427883 474 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 CYP4F26P-202ENST00000433357 852 ntTSL 5 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AL118496.2-201ENST00000448300 230 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AL133351.3-201ENST00000454998 193 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC009646.1-201ENST00000510455 318 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 SAP18P1-201ENST00000512058 390 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC083906.4-201ENST00000514634 987 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 RNU6-583P-201ENST00000516012 92 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC091982.1-201ENST00000518134 520 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 UBE2CP1-201ENST00000557130 554 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 RN7SL49P-201ENST00000581392 298 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 MIR4314-201ENST00000583321 92 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 MIR4450-201ENST00000583589 65 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC060780.3-201ENST00000589464 80 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC044792.1-201ENST00000593294 196 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC091488.1-201ENST00000604239 660 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC112191.3-201ENST00000604371 277 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AL139286.1-201ENST00000604465 483 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC009686.2-201ENST00000607017 577 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AL356274.1-201ENST00000617064 410 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 MIR7156-201ENST00000620979 60 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AQP4-208ENST00000622234 891 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AL356095.2-201ENST00000624025 457 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 LYG2-206ENST00000626374 650 ntTSL 5 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 ABBA01000935.2-201ENST00000637477 838 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 OR2A3P-202ENST00000641249 1776 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 GLYAT-202ENST00000344743 1735 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms