Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 RBPJP7-201ENST00000442803 1447 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 RBPJP5-201ENST00000449433 1447 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 MIR621-201ENST00000384919 96 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 MIR130B-202ENST00000385018 82 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 AL132875.1-201ENST00000403623 949 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 MRPS21P2-201ENST00000424704 264 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 EEF1B2P3-201ENST00000447718 678 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 SEPT7P3-201ENST00000455017 621 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 Z83838.1-202ENST00000456225 839 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 ACA64.4-201ENST00000459070 127 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 AC124945.1-201ENST00000485133 188 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 AL158068.1-201ENST00000506116 616 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 AC008147.3-201ENST00000548666 354 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 NPM1P42-201ENST00000560329 862 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 AC073333.2-201ENST00000603589 769 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 RMST_5.1-201ENST00000618704 126 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 AC073869.7-201ENST00000640874 297 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 AC119674.1-220ENST00000641502 1048 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 SMG1P7-201ENST00000565246 2704 ntBASIC5.34□□□□□ -1.55
NHLRC1Q6VVB1 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 GNL2P1-201ENST00000451274 2190 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AC104966.1-201ENST00000467010 1464 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 THAP12P9-201ENST00000503971 2360 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AC016745.2-201ENST00000608834 3443 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AC004656.1-201ENST00000568479 4951 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 SNORD1C-201ENST00000363315 78 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 RNA5SP211-201ENST00000365516 117 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 NPM1P10-201ENST00000398310 865 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AL607077.1-201ENST00000401718 499 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AL096800.1-201ENST00000405326 893 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 RPL24P2-201ENST00000421023 475 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 NMD3P2-201ENST00000421815 761 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 KIF4CP-201ENST00000422742 1279 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 RPL5P2-201ENST00000429598 854 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 MTCO1P45-201ENST00000431457 267 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AL445466.1-201ENST00000448432 357 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 CCRL1P1-201ENST00000449542 1053 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AC104339.1-201ENST00000465478 348 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AC136777.2-201ENST00000522979 358 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 OR56A7P-201ENST00000524865 941 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AC122134.1-201ENST00000565664 1104 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AC007346.1-201ENST00000569208 867 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AC025857.2-201ENST00000602711 238 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 HMGB1P51-201ENST00000605166 638 ntBASIC5.33□□□□□ -1.56
NHLRC1Q6VVB1 AC009779.8-202ENST00000607990 932 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms