Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
PCDH1Q08174 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.01□□□□□ -1.29
PCDH1Q08174 MFSD8-256ENST00000641949 1640 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 AC079949.2-201ENST00000617117 2933 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
PCDH1Q08174 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
PCDH1Q08174 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
PCDH1Q08174 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
PCDH1Q08174 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.01□□□□□ -1.29
PCDH1Q08174 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
PCDH1Q08174 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDH1Q08174 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDH1Q08174 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDH1Q08174 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDH1Q08174 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC7.01□□□□□ -1.29
PCDH1Q08174 AL157698.1-201ENST00000415190 1011 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDH1Q08174 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC7.01□□□□□ -1.29
PCDH1Q08174 AL592447.1-201ENST00000447592 540 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 RPL7P14-201ENST00000449851 741 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC7.01□□□□□ -1.29
PCDH1Q08174 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 SSXP1-201ENST00000453640 473 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 RNA5SP269-201ENST00000459032 137 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDH1Q08174 PSAT1P4-201ENST00000466500 526 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 RN7SL791P-201ENST00000467868 295 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 PGBD4P1-201ENST00000473644 407 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 OR7E163P-201ENST00000505943 894 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDH1Q08174 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC7.01□□□□□ -1.29
PCDH1Q08174 EIF3KP1-201ENST00000513279 656 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.01□□□□□ -1.29
PCDH1Q08174 RN7SKP244-201ENST00000516513 307 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.01□□□□□ -1.29
PCDH1Q08174 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDH1Q08174 AC074029.1-201ENST00000552531 1044 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDH1Q08174 ZNF519P2-201ENST00000557032 169 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.01□□□□□ -1.29
PCDH1Q08174 UBE2CP4-201ENST00000561405 535 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 MIR3135A-201ENST00000578460 77 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.01□□□□□ -1.29
PCDH1Q08174 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 AC019131.2-201ENST00000609071 870 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 AC004948.1-201ENST00000609858 672 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 AC023310.4-201ENST00000613130 650 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 FAM27E3-202ENST00000614611 340 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 AC090517.2-201ENST00000614966 680 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
PCDH1Q08174 AC092794.2-201ENST00000620933 563 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 TEX41-256ENST00000626411 368 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDH1Q08174 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDH1Q08174 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 AC004014.2-201ENST00000623718 5122 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDH1Q08174 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDH1Q08174 ZNF101P1-201ENST00000435701 1720 ntBASIC7.01□□□□□ -1.29
PCDH1Q08174 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH1Q08174 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDH1Q08174 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7□□□□□ -1.29
PCDH1Q08174 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7□□□□□ -1.29
PCDH1Q08174 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
PCDH1Q08174 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC7□□□□□ -1.29
PCDH1Q08174 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7□□□□□ -1.29
PCDH1Q08174 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7□□□□□ -1.29
PCDH1Q08174 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7□□□□□ -1.29
PCDH1Q08174 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
PCDH1Q08174 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDH1Q08174 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDH1Q08174 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7□□□□□ -1.29
PCDH1Q08174 SEC63P2-201ENST00000503863 1939 ntBASIC7□□□□□ -1.29
PCDH1Q08174 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
PCDH1Q08174 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDH1Q08174 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7□□□□□ -1.29
PCDH1Q08174 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDH1Q08174 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC7□□□□□ -1.29
PCDH1Q08174 Y_RNA.18-201ENST00000362461 102 ntBASIC7□□□□□ -1.29
PCDH1Q08174 FAM204BP-201ENST00000369171 701 ntBASIC7□□□□□ -1.29
PCDH1Q08174 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC7□□□□□ -1.29
PCDH1Q08174 RNU6-114P-201ENST00000384704 105 ntBASIC7□□□□□ -1.29
PCDH1Q08174 SUMO2P13-201ENST00000403109 272 ntBASIC7□□□□□ -1.29
PCDH1Q08174 MIR1204-201ENST00000408388 67 ntBASIC7□□□□□ -1.29
PCDH1Q08174 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC7□□□□□ -1.29
PCDH1Q08174 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 2228.4 ms