Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 MTHFD2P5-201ENST00000320415 844 ntBASIC5.53□□□□□ -1.52
LTBQ06643 RNA5SP110-201ENST00000362638 115 ntBASIC5.53□□□□□ -1.52
LTBQ06643 RNA5SP375-201ENST00000362975 119 ntBASIC5.53□□□□□ -1.52
LTBQ06643 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LTBQ06643 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LTBQ06643 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LTBQ06643 RN7SKP108-201ENST00000411367 328 ntBASIC5.53□□□□□ -1.52
LTBQ06643 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.53□□□□□ -1.52
LTBQ06643 PTCD2P2-201ENST00000415579 1095 ntBASIC5.53□□□□□ -1.52
LTBQ06643 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.53□□□□□ -1.52
LTBQ06643 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.53□□□□□ -1.52
LTBQ06643 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LTBQ06643 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.53□□□□□ -1.52
LTBQ06643 MTCO2P17-201ENST00000424336 677 ntBASIC5.53□□□□□ -1.52
LTBQ06643 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.53□□□□□ -1.52
LTBQ06643 TRGV7-201ENST00000427089 353 ntBASIC5.53□□□□□ -1.52
LTBQ06643 MAPRE1P3-201ENST00000435438 796 ntBASIC5.53□□□□□ -1.52
LTBQ06643 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.53□□□□□ -1.52
LTBQ06643 RPL6P30-201ENST00000443382 862 ntBASIC5.53□□□□□ -1.52
LTBQ06643 AL161636.2-201ENST00000445179 927 ntBASIC5.53□□□□□ -1.52
LTBQ06643 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.53□□□□□ -1.52
LTBQ06643 HLA-DPA3-207ENST00000454398 229 ntBASIC5.53□□□□□ -1.52
LTBQ06643 HMGN1P8-201ENST00000463578 288 ntBASIC5.53□□□□□ -1.52
LTBQ06643 PSMA2P2-201ENST00000504319 686 ntBASIC5.53□□□□□ -1.52
LTBQ06643 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.53□□□□□ -1.52
LTBQ06643 AC025768.1-201ENST00000510057 267 ntBASIC5.53□□□□□ -1.52
LTBQ06643 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.53□□□□□ -1.52
LTBQ06643 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.53□□□□□ -1.52
LTBQ06643 TPM3P3-201ENST00000521343 354 ntBASIC5.53□□□□□ -1.52
LTBQ06643 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.53□□□□□ -1.52
LTBQ06643 AL049874.4-201ENST00000557593 255 ntBASIC5.53□□□□□ -1.52
LTBQ06643 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.53□□□□□ -1.52
LTBQ06643 AC007225.2-201ENST00000562529 256 ntBASIC5.53□□□□□ -1.52
LTBQ06643 AL390726.5-202ENST00000564800 256 ntBASIC5.53□□□□□ -1.52
LTBQ06643 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.53□□□□□ -1.52
LTBQ06643 AC008507.3-201ENST00000585753 472 ntBASIC5.53□□□□□ -1.52
LTBQ06643 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.53□□□□□ -1.52
LTBQ06643 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
LTBQ06643 AL050303.3-201ENST00000613704 284 ntBASIC5.53□□□□□ -1.52
LTBQ06643 AC126175.1-201ENST00000617041 758 ntBASIC5.53□□□□□ -1.52
LTBQ06643 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.53□□□□□ -1.52
LTBQ06643 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.53□□□□□ -1.52
LTBQ06643 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.53□□□□□ -1.52
LTBQ06643 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LTBQ06643 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
LTBQ06643 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LTBQ06643 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LTBQ06643 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LTBQ06643 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.53□□□□□ -1.52
LTBQ06643 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
LTBQ06643 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.53□□□□□ -1.52
LTBQ06643 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.53□□□□□ -1.52
LTBQ06643 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.53□□□□□ -1.52
LTBQ06643 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LTBQ06643 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LTBQ06643 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
LTBQ06643 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.53□□□□□ -1.52
LTBQ06643 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LTBQ06643 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LTBQ06643 AL591135.1-201ENST00000401578 5914 ntBASIC5.52□□□□□ -1.53
LTBQ06643 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LTBQ06643 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LTBQ06643 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LTBQ06643 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
LTBQ06643 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LTBQ06643 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LTBQ06643 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LTBQ06643 AC078880.4-201ENST00000617627 1749 ntBASIC5.52□□□□□ -1.53
LTBQ06643 AC091305.2-201ENST00000624049 1576 ntBASIC5.52□□□□□ -1.53
LTBQ06643 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LTBQ06643 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.52□□□□□ -1.53
LTBQ06643 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LTBQ06643 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LTBQ06643 RNA5SP242-201ENST00000364171 118 ntBASIC5.52□□□□□ -1.53
LTBQ06643 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.52□□□□□ -1.53
LTBQ06643 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.52□□□□□ -1.53
LTBQ06643 AC136624.1-201ENST00000400791 413 ntBASIC5.52□□□□□ -1.53
LTBQ06643 AL139805.1-201ENST00000407837 289 ntBASIC5.52□□□□□ -1.53
LTBQ06643 MIR1178-201ENST00000408396 91 ntBASIC5.52□□□□□ -1.53
LTBQ06643 OR51A6P-201ENST00000418680 1004 ntBASIC5.52□□□□□ -1.53
LTBQ06643 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.52□□□□□ -1.53
LTBQ06643 AC021876.1-201ENST00000425959 359 ntBASIC5.52□□□□□ -1.53
LTBQ06643 MTND6P12-201ENST00000428247 522 ntBASIC5.52□□□□□ -1.53
LTBQ06643 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.52□□□□□ -1.53
LTBQ06643 AL390879.1-201ENST00000439143 386 ntBASIC5.52□□□□□ -1.53
LTBQ06643 AL645936.1-201ENST00000441979 518 ntBASIC5.52□□□□□ -1.53
LTBQ06643 AC010240.2-201ENST00000445363 1205 ntBASIC5.52□□□□□ -1.53
LTBQ06643 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.52□□□□□ -1.53
LTBQ06643 RPS3AP53-201ENST00000454716 778 ntBASIC5.52□□□□□ -1.53
LTBQ06643 EIF2S2P4-201ENST00000461070 984 ntBASIC5.52□□□□□ -1.53
LTBQ06643 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.52□□□□□ -1.53
LTBQ06643 AC008410.1-201ENST00000483777 339 ntBASIC5.52□□□□□ -1.53
LTBQ06643 RPS23P1-201ENST00000491662 432 ntBASIC5.52□□□□□ -1.53
LTBQ06643 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.52□□□□□ -1.53
LTBQ06643 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.52□□□□□ -1.53
LTBQ06643 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.52□□□□□ -1.53
LTBQ06643 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.52□□□□□ -1.53
LTBQ06643 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LTBQ06643 AC138701.1-201ENST00000524329 714 ntBASIC5.52□□□□□ -1.53
LTBQ06643 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms