Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MARK2P4-201ENST00000503381 2380 ntBASIC6.65□□□□□ -1.35
GABPAQ06546 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
GABPAQ06546 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.65□□□□□ -1.35
GABPAQ06546 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
GABPAQ06546 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.65□□□□□ -1.35
GABPAQ06546 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
GABPAQ06546 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.35
GABPAQ06546 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
GABPAQ06546 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
GABPAQ06546 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
GABPAQ06546 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.64□□□□□ -1.35
GABPAQ06546 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
GABPAQ06546 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
GABPAQ06546 AC068769.1-201ENST00000474767 2426 ntBASIC6.64□□□□□ -1.35
GABPAQ06546 PWAR1-201ENST00000624188 2414 ntBASIC6.64□□□□□ -1.35
GABPAQ06546 RN7SKP28-201ENST00000364770 305 ntBASIC6.64□□□□□ -1.35
GABPAQ06546 RNU1-59P-201ENST00000364829 162 ntBASIC6.64□□□□□ -1.35
GABPAQ06546 RNU6-171P-201ENST00000384354 107 ntBASIC6.64□□□□□ -1.35
GABPAQ06546 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.64□□□□□ -1.35
GABPAQ06546 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.64□□□□□ -1.35
GABPAQ06546 AL163193.1-201ENST00000444895 788 ntBASIC6.64□□□□□ -1.35
GABPAQ06546 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.64□□□□□ -1.35
GABPAQ06546 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
GABPAQ06546 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.64□□□□□ -1.35
GABPAQ06546 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.64□□□□□ -1.35
GABPAQ06546 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.64□□□□□ -1.35
GABPAQ06546 DPPA3P2-201ENST00000553589 478 ntBASIC6.64□□□□□ -1.35
GABPAQ06546 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.64□□□□□ -1.35
GABPAQ06546 NPM1P45-201ENST00000583151 559 ntBASIC6.64□□□□□ -1.35
GABPAQ06546 U1.25-201ENST00000614085 162 ntBASIC6.64□□□□□ -1.35
GABPAQ06546 AL118522.2-201ENST00000616045 615 ntBASIC6.64□□□□□ -1.35
GABPAQ06546 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
GABPAQ06546 U1.34-201ENST00000618578 162 ntBASIC6.64□□□□□ -1.35
GABPAQ06546 U1.31-201ENST00000620022 160 ntBASIC6.64□□□□□ -1.35
GABPAQ06546 MAPK10-350ENST00000641777 965 ntBASIC6.64□□□□□ -1.35
GABPAQ06546 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.64□□□□□ -1.35
GABPAQ06546 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.64□□□□□ -1.35
GABPAQ06546 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.64□□□□□ -1.35
GABPAQ06546 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.64□□□□□ -1.35
GABPAQ06546 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
GABPAQ06546 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
GABPAQ06546 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GABPAQ06546 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GABPAQ06546 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GABPAQ06546 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GABPAQ06546 RN7SKP59-201ENST00000410520 314 ntBASIC6.63□□□□□ -1.35
GABPAQ06546 AL355433.1-201ENST00000422804 300 ntBASIC6.63□□□□□ -1.35
GABPAQ06546 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC6.63□□□□□ -1.35
GABPAQ06546 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
GABPAQ06546 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.63□□□□□ -1.35
GABPAQ06546 RN7SL799P-201ENST00000475891 298 ntBASIC6.63□□□□□ -1.35
GABPAQ06546 RPS7P6-201ENST00000485777 579 ntBASIC6.63□□□□□ -1.35
GABPAQ06546 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.63□□□□□ -1.35
GABPAQ06546 AC021146.10-201ENST00000515628 706 ntBASIC6.63□□□□□ -1.35
GABPAQ06546 BX510359.5-201ENST00000515651 304 ntBASIC6.63□□□□□ -1.35
GABPAQ06546 RNA5SP34-201ENST00000516887 130 ntBASIC6.63□□□□□ -1.35
GABPAQ06546 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.63□□□□□ -1.35
GABPAQ06546 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
GABPAQ06546 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
GABPAQ06546 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
GABPAQ06546 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.63□□□□□ -1.35
GABPAQ06546 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.63□□□□□ -1.35
GABPAQ06546 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
GABPAQ06546 DHFRP1-201ENST00000579682 559 ntBASIC6.63□□□□□ -1.35
GABPAQ06546 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.63□□□□□ -1.35
GABPAQ06546 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
GABPAQ06546 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.63□□□□□ -1.35
GABPAQ06546 MIR6719-201ENST00000622428 87 ntBASIC6.63□□□□□ -1.35
GABPAQ06546 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.63□□□□□ -1.35
GABPAQ06546 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GABPAQ06546 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GABPAQ06546 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
GABPAQ06546 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.63□□□□□ -1.35
GABPAQ06546 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.63□□□□□ -1.35
GABPAQ06546 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.63□□□□□ -1.35
GABPAQ06546 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.62□□□□□ -1.35
GABPAQ06546 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.62□□□□□ -1.35
GABPAQ06546 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
GABPAQ06546 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
GABPAQ06546 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.62□□□□□ -1.35
GABPAQ06546 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
GABPAQ06546 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
GABPAQ06546 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
GABPAQ06546 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.62□□□□□ -1.35
GABPAQ06546 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.62□□□□□ -1.35
GABPAQ06546 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
GABPAQ06546 AC009804.1-201ENST00000400949 179 ntBASIC6.62□□□□□ -1.35
GABPAQ06546 SNORA11B-201ENST00000408175 129 ntBASIC6.62□□□□□ -1.35
GABPAQ06546 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.62□□□□□ -1.35
GABPAQ06546 AL596266.1-201ENST00000448132 400 ntBASIC6.62□□□□□ -1.35
GABPAQ06546 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.62□□□□□ -1.35
GABPAQ06546 RN7SL727P-201ENST00000482164 296 ntBASIC6.62□□□□□ -1.35
GABPAQ06546 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.62□□□□□ -1.35
GABPAQ06546 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.62□□□□□ -1.35
GABPAQ06546 AC027308.1-201ENST00000517993 110 ntBASIC6.62□□□□□ -1.35
GABPAQ06546 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.62□□□□□ -1.35
GABPAQ06546 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.62□□□□□ -1.35
GABPAQ06546 AL513327.3-201ENST00000602618 469 ntBASIC6.62□□□□□ -1.35
GABPAQ06546 HIRAP1-201ENST00000605318 787 ntBASIC6.62□□□□□ -1.35
GABPAQ06546 AL133481.2-203ENST00000607558 139 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms