Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH11P55287 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH11P55287 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH11P55287 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH11P55287 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH11P55287 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH11P55287 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH11P55287 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
CDH11P55287 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CDH11P55287 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH11P55287 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH11P55287 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH11P55287 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH11P55287 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CDH11P55287 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.41□□□□□ -1.54
CDH11P55287 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CDH11P55287 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CDH11P55287 Y_RNA.62-201ENST00000362840 99 ntBASIC5.41□□□□□ -1.54
CDH11P55287 RN7SKP15-201ENST00000364742 309 ntBASIC5.41□□□□□ -1.54
CDH11P55287 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH11P55287 RNU6-564P-201ENST00000410983 104 ntBASIC5.41□□□□□ -1.54
CDH11P55287 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH11P55287 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH11P55287 METTL15P3-201ENST00000415522 1221 ntBASIC5.41□□□□□ -1.54
CDH11P55287 RPS7P8-201ENST00000418311 581 ntBASIC5.41□□□□□ -1.54
CDH11P55287 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.41□□□□□ -1.54
CDH11P55287 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH11P55287 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH11P55287 DNAJA1P5-201ENST00000440278 943 ntBASIC5.41□□□□□ -1.54
CDH11P55287 AL512593.1-201ENST00000444758 779 ntBASIC5.41□□□□□ -1.54
CDH11P55287 AL590004.3-202ENST00000445883 451 ntBASIC5.41□□□□□ -1.54
CDH11P55287 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH11P55287 AC016724.1-201ENST00000453215 421 ntBASIC5.41□□□□□ -1.54
CDH11P55287 PPIAP7-201ENST00000454070 489 ntBASIC5.41□□□□□ -1.54
CDH11P55287 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH11P55287 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH11P55287 AC012123.2-201ENST00000485809 248 ntBASIC5.41□□□□□ -1.54
CDH11P55287 RWDD4P1-201ENST00000488019 565 ntBASIC5.41□□□□□ -1.54
CDH11P55287 OR7E99P-201ENST00000505750 922 ntBASIC5.41□□□□□ -1.54
CDH11P55287 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.41□□□□□ -1.54
CDH11P55287 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.41□□□□□ -1.54
CDH11P55287 AC090958.1-201ENST00000511122 351 ntBASIC5.41□□□□□ -1.54
CDH11P55287 AC026688.1-201ENST00000520639 1168 ntBASIC5.41□□□□□ -1.54
CDH11P55287 AP000620.1-201ENST00000527147 504 ntBASIC5.41□□□□□ -1.54
CDH11P55287 AC036111.2-201ENST00000533247 901 ntBASIC5.41□□□□□ -1.54
CDH11P55287 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH11P55287 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH11P55287 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.41□□□□□ -1.54
CDH11P55287 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH11P55287 AC007346.2-201ENST00000564816 892 ntBASIC5.41□□□□□ -1.54
CDH11P55287 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH11P55287 AC008507.3-201ENST00000585753 472 ntBASIC5.41□□□□□ -1.54
CDH11P55287 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH11P55287 AC073333.2-201ENST00000603589 769 ntBASIC5.41□□□□□ -1.54
CDH11P55287 AP001823.1-201ENST00000604056 1003 ntBASIC5.41□□□□□ -1.54
CDH11P55287 AC015802.5-201ENST00000607478 399 ntBASIC5.41□□□□□ -1.54
CDH11P55287 AL136370.1-201ENST00000608166 691 ntBASIC5.41□□□□□ -1.54
CDH11P55287 RFPL4AP6-201ENST00000616792 846 ntBASIC5.41□□□□□ -1.54
CDH11P55287 AC106730.3-201ENST00000624568 641 ntBASIC5.41□□□□□ -1.54
CDH11P55287 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH11P55287 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH11P55287 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH11P55287 LYARP1-201ENST00000436977 1501 ntBASIC5.41□□□□□ -1.54
CDH11P55287 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH11P55287 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH11P55287 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH11P55287 AL137058.3-201ENST00000624531 3099 ntBASIC5.41□□□□□ -1.54
CDH11P55287 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
CDH11P55287 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH11P55287 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH11P55287 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH11P55287 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH11P55287 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH11P55287 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH11P55287 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH11P55287 AL158152.1-201ENST00000602652 1435 ntBASIC5.4□□□□□ -1.54
CDH11P55287 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH11P55287 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH11P55287 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH11P55287 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH11P55287 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH11P55287 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH11P55287 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH11P55287 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH11P55287 CASC19-260ENST00000641828 2001 ntBASIC5.4□□□□□ -1.54
CDH11P55287 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH11P55287 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
CDH11P55287 AC130304.1-201ENST00000622942 2385 ntBASIC5.4□□□□□ -1.54
CDH11P55287 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH11P55287 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH11P55287 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH11P55287 OR10R3P-201ENST00000361688 942 ntBASIC5.4□□□□□ -1.54
CDH11P55287 RNU6-819P-201ENST00000364116 107 ntBASIC5.4□□□□□ -1.54
CDH11P55287 SNORA51.9-201ENST00000384295 124 ntBASIC5.4□□□□□ -1.54
CDH11P55287 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH11P55287 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH11P55287 RPS15AP30-201ENST00000420976 390 ntBASIC5.4□□□□□ -1.54
CDH11P55287 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH11P55287 AC106901.1-201ENST00000425086 698 ntBASIC5.4□□□□□ -1.54
CDH11P55287 AC130360.1-201ENST00000425489 1117 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms