Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC5.5□□□□□ -1.53
GTF2A1P52655 AC133552.4-201ENST00000576103 676 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 RN7SL131P-201ENST00000579043 256 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 AF186192.2-204ENST00000581667 524 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 RPL29P33-201ENST00000587474 316 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GTF2A1P52655 AC004805.3-201ENST00000603178 310 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 AC024085.1-201ENST00000604299 432 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 RNU6-84P-201ENST00000607737 102 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 uc_338.33-201ENST00000614988 170 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 MIR7159-201ENST00000620587 66 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
GTF2A1P52655 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
GTF2A1P52655 AP004607.3-201ENST00000530354 3915 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GTF2A1P52655 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.5□□□□□ -1.53
GTF2A1P52655 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
GTF2A1P52655 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
GTF2A1P52655 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GTF2A1P52655 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GTF2A1P52655 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GTF2A1P52655 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GTF2A1P52655 AC005702.3-201ENST00000585345 1447 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GTF2A1P52655 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
GTF2A1P52655 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
GTF2A1P52655 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GTF2A1P52655 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.49□□□□□ -1.53
GTF2A1P52655 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GTF2A1P52655 RNA5SP91-201ENST00000390902 119 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 RN7SKP166-201ENST00000410812 305 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 RPL12P9-201ENST00000412942 488 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 PCNPP4-201ENST00000414817 517 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.49□□□□□ -1.53
GTF2A1P52655 AC083862.1-201ENST00000427378 1242 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.49□□□□□ -1.53
GTF2A1P52655 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.49□□□□□ -1.53
GTF2A1P52655 CYCSP24-201ENST00000445119 316 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 AL020997.1-201ENST00000446554 349 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 RPL23AP60-201ENST00000450011 454 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC5.49□□□□□ -1.53
GTF2A1P52655 SNORD125-201ENST00000459538 96 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.49□□□□□ -1.53
GTF2A1P52655 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC5.49□□□□□ -1.53
GTF2A1P52655 RPS3AP49-201ENST00000472161 790 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.49□□□□□ -1.53
GTF2A1P52655 RN7SL70P-201ENST00000478322 302 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.49□□□□□ -1.53
GTF2A1P52655 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.49□□□□□ -1.53
GTF2A1P52655 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.49□□□□□ -1.53
GTF2A1P52655 AC010343.2-201ENST00000510162 224 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.49□□□□□ -1.53
GTF2A1P52655 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.49□□□□□ -1.53
GTF2A1P52655 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 AC021269.1-201ENST00000526860 705 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GTF2A1P52655 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC5.49□□□□□ -1.53
GTF2A1P52655 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.49□□□□□ -1.53
GTF2A1P52655 AP005119.2-201ENST00000579735 1105 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 AC005332.4-201ENST00000592752 579 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.49□□□□□ -1.53
GTF2A1P52655 AC114477.1-201ENST00000605097 605 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.49□□□□□ -1.53
GTF2A1P52655 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.49□□□□□ -1.53
GTF2A1P52655 AC131238.1-201ENST00000617135 328 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 AC018558.4-201ENST00000622153 281 ntBASIC5.49□□□□□ -1.53
GTF2A1P52655 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.49□□□□□ -1.53
GTF2A1P52655 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GTF2A1P52655 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GTF2A1P52655 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GTF2A1P52655 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GTF2A1P52655 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GTF2A1P52655 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.49□□□□□ -1.53
GTF2A1P52655 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
GTF2A1P52655 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GTF2A1P52655 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.49□□□□□ -1.53
GTF2A1P52655 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
GTF2A1P52655 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.48□□□□□ -1.53
GTF2A1P52655 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GTF2A1P52655 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GTF2A1P52655 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
GTF2A1P52655 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
GTF2A1P52655 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
GTF2A1P52655 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GTF2A1P52655 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GTF2A1P52655 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.48□□□□□ -1.53
GTF2A1P52655 OR1L6-202ENST00000373684 1044 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 AL121834.1-202ENST00000404494 277 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 FTH1P26-201ENST00000406512 701 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 PPIAP23-201ENST00000420099 497 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 GRPEL2P2-201ENST00000421856 670 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 RPL3P11-201ENST00000434028 1146 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 AC019185.3-201ENST00000438805 323 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.48□□□□□ -1.53
GTF2A1P52655 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GTF2A1P52655 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC5.48□□□□□ -1.53
GTF2A1P52655 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.48□□□□□ -1.53
GTF2A1P52655 AC112206.1-201ENST00000468416 477 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 UBFD1P1-201ENST00000473259 814 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 RN7SL714P-201ENST00000487050 298 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 355.2 ms