Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RN7SKP279-201ENST00000411383 298 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 AL445213.1-201ENST00000412589 747 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 RNGTTP1-201ENST00000420965 728 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.05□□□□□ -1.6
CX3CR1P49238 MTND2P40-201ENST00000436718 841 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 AC023271.1-201ENST00000445936 1090 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 AC093166.3-201ENST00000448785 303 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 AC068491.1-201ENST00000449539 1241 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.05□□□□□ -1.6
CX3CR1P49238 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.05□□□□□ -1.6
CX3CR1P49238 AC093166.4-201ENST00000457867 318 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 AC068228.1-201ENST00000461723 211 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.05□□□□□ -1.6
CX3CR1P49238 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.05□□□□□ -1.6
CX3CR1P49238 SCARNA18.1-201ENST00000516330 83 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.05□□□□□ -1.6
CX3CR1P49238 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CX3CR1P49238 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.05□□□□□ -1.6
CX3CR1P49238 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CR1P49238 AC091078.2-201ENST00000557145 559 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CR1P49238 AC002310.3-201ENST00000569728 723 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 AC019322.1-201ENST00000571869 389 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.05□□□□□ -1.6
CX3CR1P49238 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.05□□□□□ -1.6
CX3CR1P49238 NANOGP3-201ENST00000605855 286 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.05□□□□□ -1.6
CX3CR1P49238 AC108673.3-201ENST00000609183 335 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.05□□□□□ -1.6
CX3CR1P49238 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CR1P49238 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CX3CR1P49238 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CR1P49238 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.05□□□□□ -1.6
CX3CR1P49238 AC027088.4-201ENST00000611559 1947 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 AC004158.1-201ENST00000564508 4319 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CX3CR1P49238 CAP1P2-201ENST00000417455 1409 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CR1P49238 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CR1P49238 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.05□□□□□ -1.6
CX3CR1P49238 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CR1P49238 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CR1P49238 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CX3CR1P49238 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CX3CR1P49238 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.04□□□□□ -1.6
CX3CR1P49238 AF287957.1-201ENST00000607368 1595 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CR1P49238 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CR1P49238 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CR1P49238 AC011503.2-201ENST00000594230 1500 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 AL513548.1-201ENST00000562904 1724 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 COX6B1P3-201ENST00000312310 260 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CX3CR1P49238 RNA5SP187-201ENST00000384400 119 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CX3CR1P49238 AC007068.1-201ENST00000396690 844 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CR1P49238 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CR1P49238 AL354890.1-201ENST00000413730 346 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.04□□□□□ -1.6
CX3CR1P49238 AL136231.1-201ENST00000429407 730 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 EIF5AP4-201ENST00000441206 465 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CX3CR1P49238 PPIAP27-201ENST00000453800 265 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 AC104339.1-201ENST00000465478 348 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.04□□□□□ -1.6
CX3CR1P49238 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.04□□□□□ -1.6
CX3CR1P49238 RN7SL57P-201ENST00000493687 290 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 OR7E157P-201ENST00000494376 911 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 AC092349.1-201ENST00000504903 310 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 LDHAP1-201ENST00000509421 992 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CR1P49238 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.04□□□□□ -1.6
CX3CR1P49238 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CR1P49238 RNA5SP340-201ENST00000517132 107 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CR1P49238 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CR1P49238 AC084121.1-201ENST00000533882 835 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.04□□□□□ -1.6
CX3CR1P49238 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CR1P49238 AC007956.1-201ENST00000555623 542 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 AL845552.1-201ENST00000556820 323 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CR1P49238 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.04□□□□□ -1.6
CX3CR1P49238 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CR1P49238 AC008507.3-201ENST00000585753 472 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 AP001437.1-201ENST00000608783 456 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 AC015712.7-201ENST00000615211 635 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 OR8G7P-201ENST00000616658 848 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 MIR6806-201ENST00000622141 64 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.04□□□□□ -1.6
CX3CR1P49238 AC022400.9-201ENST00000623633 273 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CR1P49238 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CR1P49238 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CR1P49238 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CR1P49238 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CR1P49238 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CR1P49238 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms