Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FDFT1P37268 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.81□□□□□ -1.48
FDFT1P37268 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
FDFT1P37268 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
FDFT1P37268 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
FDFT1P37268 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FDFT1P37268 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
FDFT1P37268 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FDFT1P37268 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FDFT1P37268 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
FDFT1P37268 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
FDFT1P37268 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
FDFT1P37268 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
FDFT1P37268 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.8□□□□□ -1.48
FDFT1P37268 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.8□□□□□ -1.48
FDFT1P37268 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.8□□□□□ -1.48
FDFT1P37268 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FDFT1P37268 AC005042.1-201ENST00000393397 800 ntBASIC5.8□□□□□ -1.48
FDFT1P37268 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
FDFT1P37268 PEX12P1-201ENST00000400284 1048 ntBASIC5.8□□□□□ -1.48
FDFT1P37268 RNA5SP431-201ENST00000410312 120 ntBASIC5.8□□□□□ -1.48
FDFT1P37268 AC096921.1-201ENST00000411661 375 ntBASIC5.8□□□□□ -1.48
FDFT1P37268 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.8□□□□□ -1.48
FDFT1P37268 AK4P4-201ENST00000419465 646 ntBASIC5.8□□□□□ -1.48
FDFT1P37268 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.8□□□□□ -1.48
FDFT1P37268 NDUFS5P5-201ENST00000437256 321 ntBASIC5.8□□□□□ -1.48
FDFT1P37268 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.8□□□□□ -1.48
FDFT1P37268 AL136455.1-201ENST00000441083 1240 ntBASIC5.8□□□□□ -1.48
FDFT1P37268 LINC02210-201ENST00000444561 288 ntBASIC5.8□□□□□ -1.48
FDFT1P37268 AC104339.1-201ENST00000465478 348 ntBASIC5.8□□□□□ -1.48
FDFT1P37268 AC073610.1-201ENST00000489971 396 ntBASIC5.8□□□□□ -1.48
FDFT1P37268 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.8□□□□□ -1.48
FDFT1P37268 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.8□□□□□ -1.48
FDFT1P37268 AC021678.3-201ENST00000517893 476 ntBASIC5.8□□□□□ -1.48
FDFT1P37268 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.8□□□□□ -1.48
FDFT1P37268 IGLV3-30-201ENST00000524362 298 ntBASIC5.8□□□□□ -1.48
FDFT1P37268 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
FDFT1P37268 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.8□□□□□ -1.48
FDFT1P37268 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.8□□□□□ -1.48
FDFT1P37268 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.8□□□□□ -1.48
FDFT1P37268 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.8□□□□□ -1.48
FDFT1P37268 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.8□□□□□ -1.48
FDFT1P37268 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
FDFT1P37268 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.8□□□□□ -1.48
FDFT1P37268 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.8□□□□□ -1.48
FDFT1P37268 AC022919.1-201ENST00000624979 626 ntBASIC5.8□□□□□ -1.48
FDFT1P37268 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.8□□□□□ -1.48
FDFT1P37268 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
FDFT1P37268 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FDFT1P37268 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
FDFT1P37268 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
FDFT1P37268 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
FDFT1P37268 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
FDFT1P37268 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.8□□□□□ -1.48
FDFT1P37268 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
FDFT1P37268 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
FDFT1P37268 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
FDFT1P37268 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
FDFT1P37268 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
FDFT1P37268 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.79□□□□□ -1.48
FDFT1P37268 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
FDFT1P37268 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
FDFT1P37268 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
FDFT1P37268 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
FDFT1P37268 AL159987.1-201ENST00000347911 293 ntBASIC5.79□□□□□ -1.48
FDFT1P37268 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.79□□□□□ -1.48
FDFT1P37268 RNA5SP273-201ENST00000362484 113 ntBASIC5.79□□□□□ -1.48
FDFT1P37268 RNU1-65P-201ENST00000363919 148 ntBASIC5.79□□□□□ -1.48
FDFT1P37268 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
FDFT1P37268 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
FDFT1P37268 SETP9-201ENST00000423837 832 ntBASIC5.79□□□□□ -1.48
FDFT1P37268 NPM1P18-201ENST00000434232 732 ntBASIC5.79□□□□□ -1.48
FDFT1P37268 AC013410.1-201ENST00000436223 1232 ntBASIC5.79□□□□□ -1.48
FDFT1P37268 RPL5P25-201ENST00000441148 775 ntBASIC5.79□□□□□ -1.48
FDFT1P37268 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.79□□□□□ -1.48
FDFT1P37268 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.79□□□□□ -1.48
FDFT1P37268 NXT1P1-201ENST00000458481 316 ntBASIC5.79□□□□□ -1.48
FDFT1P37268 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FDFT1P37268 RPL32P33-201ENST00000487023 394 ntBASIC5.79□□□□□ -1.48
FDFT1P37268 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.79□□□□□ -1.48
FDFT1P37268 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
FDFT1P37268 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.79□□□□□ -1.48
FDFT1P37268 RNA5SP438-201ENST00000516561 112 ntBASIC5.79□□□□□ -1.48
FDFT1P37268 SCARNA6.1-201ENST00000516989 238 ntBASIC5.79□□□□□ -1.48
FDFT1P37268 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.79□□□□□ -1.48
FDFT1P37268 AP000648.1-201ENST00000529682 397 ntBASIC5.79□□□□□ -1.48
FDFT1P37268 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.79□□□□□ -1.48
FDFT1P37268 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.79□□□□□ -1.48
FDFT1P37268 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.79□□□□□ -1.48
FDFT1P37268 LINC00556-201ENST00000569603 412 ntBASIC5.79□□□□□ -1.48
FDFT1P37268 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
FDFT1P37268 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FDFT1P37268 AL031601.1-201ENST00000605702 394 ntBASIC5.79□□□□□ -1.48
FDFT1P37268 AC024884.1-201ENST00000620583 399 ntBASIC5.79□□□□□ -1.48
FDFT1P37268 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.79□□□□□ -1.48
FDFT1P37268 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FDFT1P37268 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.79□□□□□ -1.48
FDFT1P37268 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.79□□□□□ -1.48
FDFT1P37268 AC132825.8-201ENST00000640783 297 ntBASIC5.79□□□□□ -1.48
FDFT1P37268 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms