Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 RPL34P33-201ENST00000486062 334 ntBASIC6.24□□□□□ -1.41
HOXD12P35452 AC106800.3-201ENST00000511389 308 ntBASIC6.24□□□□□ -1.41
HOXD12P35452 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXD12P35452 TMEM97P2-201ENST00000517841 403 ntBASIC6.24□□□□□ -1.41
HOXD12P35452 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXD12P35452 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.24□□□□□ -1.41
HOXD12P35452 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXD12P35452 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD12P35452 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXD12P35452 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXD12P35452 AC007225.2-201ENST00000562529 256 ntBASIC6.24□□□□□ -1.41
HOXD12P35452 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXD12P35452 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXD12P35452 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXD12P35452 OR4H6P-202ENST00000603819 340 ntBASIC6.24□□□□□ -1.41
HOXD12P35452 BNIP3P19-201ENST00000605397 577 ntBASIC6.24□□□□□ -1.41
HOXD12P35452 AC135803.1-201ENST00000608748 565 ntBASIC6.24□□□□□ -1.41
HOXD12P35452 AC005393.1-201ENST00000617916 584 ntBASIC6.24□□□□□ -1.41
HOXD12P35452 AL354718.1-201ENST00000619764 589 ntBASIC6.24□□□□□ -1.41
HOXD12P35452 RNU6-368P-201ENST00000620928 107 ntBASIC6.24□□□□□ -1.41
HOXD12P35452 RNU6-538P-201ENST00000622329 107 ntBASIC6.24□□□□□ -1.41
HOXD12P35452 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.24□□□□□ -1.41
HOXD12P35452 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXD12P35452 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HOXD12P35452 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD12P35452 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD12P35452 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXD12P35452 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HOXD12P35452 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXD12P35452 AP000473.2-201ENST00000602659 1537 ntBASIC6.24□□□□□ -1.41
HOXD12P35452 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXD12P35452 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD12P35452 AC006511.3-201ENST00000624929 1783 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD12P35452 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXD12P35452 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXD12P35452 CASC19-228ENST00000641414 1684 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD12P35452 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HOXD12P35452 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXD12P35452 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD12P35452 CR788268.1-201ENST00000603931 1809 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD12P35452 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD12P35452 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXD12P35452 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD12P35452 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
HOXD12P35452 AL358178.1-201ENST00000407698 397 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 RN7SKP121-201ENST00000410842 305 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 RN7SKP293-201ENST00000411389 296 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 AL512504.1-201ENST00000415494 778 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD12P35452 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXD12P35452 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.23□□□□□ -1.41
HOXD12P35452 TRIM60P16-201ENST00000444048 694 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXD12P35452 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXD12P35452 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXD12P35452 SEPT7P3-201ENST00000455017 621 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 VPS25P1-201ENST00000455691 508 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 CST12P-201ENST00000457644 362 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 AC026348.1-201ENST00000462549 1053 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXD12P35452 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HOXD12P35452 AC010343.2-201ENST00000510162 224 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXD12P35452 AC027308.1-201ENST00000517993 110 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXD12P35452 OR7E10P-201ENST00000526420 991 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 AC091078.2-201ENST00000557145 559 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXD12P35452 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXD12P35452 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD12P35452 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HOXD12P35452 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXD12P35452 AC073333.2-201ENST00000603589 769 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 AL157899.1-201ENST00000604110 936 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXD12P35452 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXD12P35452 AC015722.2-201ENST00000622210 551 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 AC022919.1-201ENST00000624979 626 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXD12P35452 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXD12P35452 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD12P35452 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXD12P35452 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD12P35452 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD12P35452 AC007485.2-201ENST00000623493 1667 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
HOXD12P35452 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD12P35452 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD12P35452 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD12P35452 AC092724.1-201ENST00000624623 3397 ntBASIC6.23□□□□□ -1.41
HOXD12P35452 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD12P35452 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXD12P35452 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXD12P35452 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXD12P35452 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXD12P35452 AC011416.1-201ENST00000514947 1732 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms