Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.72□□□□□ -1.49
RPA3P35244 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.72□□□□□ -1.49
RPA3P35244 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RPA3P35244 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
RPA3P35244 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.71□□□□□ -1.49
RPA3P35244 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
RPA3P35244 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
RPA3P35244 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
RPA3P35244 AC083899.1-201ENST00000454465 3819 ntBASIC5.71□□□□□ -1.49
RPA3P35244 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RPA3P35244 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RPA3P35244 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.71□□□□□ -1.5
RPA3P35244 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
RPA3P35244 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RPA3P35244 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RPA3P35244 AL121886.1-201ENST00000358609 435 ntBASIC5.71□□□□□ -1.5
RPA3P35244 AC005042.1-201ENST00000393397 800 ntBASIC5.71□□□□□ -1.5
RPA3P35244 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.71□□□□□ -1.5
RPA3P35244 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.71□□□□□ -1.5
RPA3P35244 BX284632.2-201ENST00000421091 399 ntBASIC5.71□□□□□ -1.5
RPA3P35244 AL136231.1-201ENST00000429407 730 ntBASIC5.71□□□□□ -1.5
RPA3P35244 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.71□□□□□ -1.5
RPA3P35244 AL512605.1-202ENST00000441919 381 ntBASIC5.71□□□□□ -1.5
RPA3P35244 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.71□□□□□ -1.5
RPA3P35244 AL359955.2-201ENST00000445380 353 ntBASIC5.71□□□□□ -1.5
RPA3P35244 OR52E7P-201ENST00000452394 933 ntBASIC5.71□□□□□ -1.5
RPA3P35244 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.71□□□□□ -1.5
RPA3P35244 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.71□□□□□ -1.5
RPA3P35244 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RPA3P35244 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RPA3P35244 GAPDHP71-201ENST00000511530 1003 ntBASIC5.71□□□□□ -1.5
RPA3P35244 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.71□□□□□ -1.5
RPA3P35244 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.71□□□□□ -1.5
RPA3P35244 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.71□□□□□ -1.5
RPA3P35244 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.71□□□□□ -1.5
RPA3P35244 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.71□□□□□ -1.5
RPA3P35244 AC005363.1-201ENST00000530779 351 ntBASIC5.71□□□□□ -1.5
RPA3P35244 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RPA3P35244 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.71□□□□□ -1.5
RPA3P35244 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.71□□□□□ -1.5
RPA3P35244 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RPA3P35244 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RPA3P35244 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.71□□□□□ -1.5
RPA3P35244 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.71□□□□□ -1.5
RPA3P35244 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RPA3P35244 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RPA3P35244 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RPA3P35244 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RPA3P35244 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RPA3P35244 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RPA3P35244 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RPA3P35244 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.7□□□□□ -1.5
RPA3P35244 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.7□□□□□ -1.5
RPA3P35244 AC018809.2-201ENST00000602436 3823 ntBASIC5.7□□□□□ -1.5
RPA3P35244 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
RPA3P35244 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.7□□□□□ -1.5
RPA3P35244 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RPA3P35244 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.7□□□□□ -1.5
RPA3P35244 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.7□□□□□ -1.5
RPA3P35244 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RPA3P35244 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RPA3P35244 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.7□□□□□ -1.5
RPA3P35244 RNA5SP273-201ENST00000362484 113 ntBASIC5.7□□□□□ -1.5
RPA3P35244 RNA5SP477-201ENST00000362639 119 ntBASIC5.7□□□□□ -1.5
RPA3P35244 RN7SKP81-201ENST00000365603 331 ntBASIC5.7□□□□□ -1.5
RPA3P35244 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RPA3P35244 RAB5CP1-201ENST00000395972 580 ntBASIC5.7□□□□□ -1.5
RPA3P35244 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.7□□□□□ -1.5
RPA3P35244 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.7□□□□□ -1.5
RPA3P35244 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.7□□□□□ -1.5
RPA3P35244 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.7□□□□□ -1.5
RPA3P35244 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.7□□□□□ -1.5
RPA3P35244 NDUFB4P8-201ENST00000435351 367 ntBASIC5.7□□□□□ -1.5
RPA3P35244 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.7□□□□□ -1.5
RPA3P35244 VN1R110P-201ENST00000438988 971 ntBASIC5.7□□□□□ -1.5
RPA3P35244 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.7□□□□□ -1.5
RPA3P35244 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.7□□□□□ -1.5
RPA3P35244 OR7E116P-201ENST00000448529 957 ntBASIC5.7□□□□□ -1.5
RPA3P35244 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.7□□□□□ -1.5
RPA3P35244 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.7□□□□□ -1.5
RPA3P35244 RN7SL57P-201ENST00000493687 290 ntBASIC5.7□□□□□ -1.5
RPA3P35244 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.7□□□□□ -1.5
RPA3P35244 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RPA3P35244 Y_RNA.667-201ENST00000516212 107 ntBASIC5.7□□□□□ -1.5
RPA3P35244 PCNAP4-201ENST00000532690 730 ntBASIC5.7□□□□□ -1.5
RPA3P35244 AC091078.2-201ENST00000557145 559 ntBASIC5.7□□□□□ -1.5
RPA3P35244 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.7□□□□□ -1.5
RPA3P35244 FAM27E4-201ENST00000605259 342 ntBASIC5.7□□□□□ -1.5
RPA3P35244 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.7□□□□□ -1.5
RPA3P35244 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.7□□□□□ -1.5
RPA3P35244 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RPA3P35244 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
RPA3P35244 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RPA3P35244 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RPA3P35244 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RPA3P35244 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RPA3P35244 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.7□□□□□ -1.5
RPA3P35244 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RPA3P35244 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RPA3P35244 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms