Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RXRBP28702 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC8.2□□□□□ -1.1
RXRBP28702 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RXRBP28702 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.2□□□□□ -1.1
RXRBP28702 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
RXRBP28702 CRP-204ENST00000368112 787 ntTSL 2 BASIC8.2□□□□□ -1.1
RXRBP28702 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC8.2□□□□□ -1.1
RXRBP28702 AL355375.1-201ENST00000405686 392 ntBASIC8.2□□□□□ -1.1
RXRBP28702 OR6E1P-201ENST00000414424 923 ntBASIC8.2□□□□□ -1.1
RXRBP28702 AC092570.3-201ENST00000420113 693 ntBASIC8.2□□□□□ -1.1
RXRBP28702 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC8.2□□□□□ -1.1
RXRBP28702 FTH1P10-202ENST00000430907 550 ntBASIC8.2□□□□□ -1.1
RXRBP28702 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC8.2□□□□□ -1.1
RXRBP28702 AC245047.2-201ENST00000441060 530 ntBASIC8.2□□□□□ -1.1
RXRBP28702 NDUFAF4P2-201ENST00000445374 520 ntBASIC8.2□□□□□ -1.1
RXRBP28702 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC8.2□□□□□ -1.1
RXRBP28702 RN7SL547P-201ENST00000490793 290 ntBASIC8.2□□□□□ -1.1
RXRBP28702 MTND4LP2-201ENST00000502312 285 ntBASIC8.2□□□□□ -1.1
RXRBP28702 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC8.2□□□□□ -1.1
RXRBP28702 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC8.2□□□□□ -1.1
RXRBP28702 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC8.2□□□□□ -1.1
RXRBP28702 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC8.2□□□□□ -1.1
RXRBP28702 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC8.2□□□□□ -1.1
RXRBP28702 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC8.2□□□□□ -1.1
RXRBP28702 MIR4646-201ENST00000580775 63 ntBASIC8.2□□□□□ -1.1
RXRBP28702 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RXRBP28702 AL139344.1-201ENST00000605228 195 ntBASIC8.2□□□□□ -1.1
RXRBP28702 RNU4-5P-201ENST00000607255 135 ntBASIC8.2□□□□□ -1.1
RXRBP28702 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC8.2□□□□□ -1.1
RXRBP28702 AC073488.2-201ENST00000631903 751 ntBASIC8.2□□□□□ -1.1
RXRBP28702 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
RXRBP28702 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RXRBP28702 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RXRBP28702 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RXRBP28702 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RXRBP28702 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
RXRBP28702 AL356317.1-201ENST00000396110 1436 ntBASIC8.2□□□□□ -1.1
RXRBP28702 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RXRBP28702 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC8.2□□□□□ -1.1
RXRBP28702 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
RXRBP28702 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RXRBP28702 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RXRBP28702 CR382285.2-201ENST00000624662 1495 ntBASIC8.19□□□□□ -1.1
RXRBP28702 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
RXRBP28702 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RXRBP28702 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC8.19□□□□□ -1.1
RXRBP28702 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RXRBP28702 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC8.19□□□□□ -1.1
RXRBP28702 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC8.19□□□□□ -1.1
RXRBP28702 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
RXRBP28702 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RXRBP28702 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RXRBP28702 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC8.19□□□□□ -1.1
RXRBP28702 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RXRBP28702 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
RXRBP28702 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RXRBP28702 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
RXRBP28702 RPL35AP24-201ENST00000413846 330 ntBASIC8.19□□□□□ -1.1
RXRBP28702 RPL26P29-201ENST00000415623 438 ntBASIC8.19□□□□□ -1.1
RXRBP28702 LIPT1P1-201ENST00000415870 1186 ntBASIC8.19□□□□□ -1.1
RXRBP28702 AC090960.1-201ENST00000421072 306 ntBASIC8.19□□□□□ -1.1
RXRBP28702 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
RXRBP28702 AC245047.5-201ENST00000437312 556 ntBASIC8.19□□□□□ -1.1
RXRBP28702 CEACAMP7-201ENST00000444105 496 ntBASIC8.19□□□□□ -1.1
RXRBP28702 ZNF736P5Y-201ENST00000451173 805 ntBASIC8.19□□□□□ -1.1
RXRBP28702 NENFP3-201ENST00000503735 313 ntBASIC8.19□□□□□ -1.1
RXRBP28702 MGST2-204ENST00000506797 634 ntTSL 2 BASIC8.19□□□□□ -1.1
RXRBP28702 MTCYBP37-201ENST00000510642 1133 ntBASIC8.19□□□□□ -1.1
RXRBP28702 AP001858.2-201ENST00000536213 601 ntBASIC8.19□□□□□ -1.1
RXRBP28702 AC006530.1-201ENST00000555980 571 ntBASIC8.19□□□□□ -1.1
RXRBP28702 AL049872.1-201ENST00000556323 322 ntBASIC8.19□□□□□ -1.1
RXRBP28702 ULK4P2-202ENST00000564187 492 ntBASIC8.19□□□□□ -1.1
RXRBP28702 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RXRBP28702 AL450270.1-201ENST00000606160 391 ntBASIC8.19□□□□□ -1.1
RXRBP28702 AL645933.2-201ENST00000606743 1207 ntBASIC8.19□□□□□ -1.1
RXRBP28702 AC004492.1-201ENST00000607036 742 ntBASIC8.19□□□□□ -1.1
RXRBP28702 AC112503.1-201ENST00000608436 391 ntBASIC8.19□□□□□ -1.1
RXRBP28702 AL139407.1-201ENST00000613826 1175 ntBASIC8.19□□□□□ -1.1
RXRBP28702 AP000346.3-201ENST00000622821 210 ntBASIC8.19□□□□□ -1.1
RXRBP28702 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RXRBP28702 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
RXRBP28702 MTCO1P25-201ENST00000414449 1799 ntBASIC8.19□□□□□ -1.1
RXRBP28702 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RXRBP28702 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC8.19□□□□□ -1.1
RXRBP28702 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
RXRBP28702 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RXRBP28702 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
RXRBP28702 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
RXRBP28702 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RXRBP28702 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RXRBP28702 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RXRBP28702 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RXRBP28702 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RXRBP28702 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC8.18□□□□□ -1.1
RXRBP28702 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
RXRBP28702 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RXRBP28702 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RXRBP28702 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RXRBP28702 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC8.18□□□□□ -1.1
RXRBP28702 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms