Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SEPT10P1-201ENST00000517342 1162 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 OR4F13P-202ENST00000560066 2054 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 GARSP1-201ENST00000570895 719 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AC008507.3-201ENST00000585753 472 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AL034374.2-201ENST00000605281 548 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AC010632.3-201ENST00000611377 369 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AL136228.1-201ENST00000622221 319 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AP002833.3-201ENST00000625075 2265 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 GNL2P1-201ENST00000451274 2190 ntBASIC5.09□□□□□ -1.59
HLA-DPB1P04440 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 RBPJP7-201ENST00000442803 1447 ntBASIC5.09□□□□□ -1.59
HLA-DPB1P04440 RBPJP5-201ENST00000449433 1447 ntBASIC5.09□□□□□ -1.59
HLA-DPB1P04440 TCP11X1-202ENST00000622971 1372 ntBASIC5.09□□□□□ -1.59
HLA-DPB1P04440 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 VN1R12P-201ENST00000403778 876 ntBASIC5.09□□□□□ -1.59
HLA-DPB1P04440 RNF10P1-201ENST00000418589 369 ntBASIC5.09□□□□□ -1.59
HLA-DPB1P04440 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 AC115283.1-201ENST00000427353 400 ntBASIC5.09□□□□□ -1.59
HLA-DPB1P04440 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 AC069154.1-201ENST00000432914 542 ntBASIC5.09□□□□□ -1.59
HLA-DPB1P04440 AC005077.1-201ENST00000449226 375 ntBASIC5.09□□□□□ -1.59
HLA-DPB1P04440 PPIAP27-201ENST00000453800 265 ntBASIC5.09□□□□□ -1.59
HLA-DPB1P04440 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 AC079905.1-201ENST00000549280 475 ntBASIC5.09□□□□□ -1.59
HLA-DPB1P04440 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 CYCSP38-201ENST00000559840 322 ntBASIC5.09□□□□□ -1.59
HLA-DPB1P04440 TXNP4-201ENST00000575018 310 ntBASIC5.09□□□□□ -1.59
HLA-DPB1P04440 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 AC145423.1-201ENST00000605712 336 ntBASIC5.09□□□□□ -1.59
HLA-DPB1P04440 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPB1P04440 AL360270.2-201ENST00000562952 5985 ntBASIC5.09□□□□□ -1.6
HLA-DPB1P04440 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
HLA-DPB1P04440 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.09□□□□□ -1.6
HLA-DPB1P04440 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 AC012254.3-201ENST00000591183 2117 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 RNFT1P3-201ENST00000340898 1052 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 AL121886.1-201ENST00000358609 435 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 OR7E156P-201ENST00000400303 464 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 AC019205.1-201ENST00000421830 730 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 PCBP2P1-201ENST00000437262 977 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 AC083899.1-201ENST00000454465 3819 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 CST12P-201ENST00000457644 362 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 AC092865.4-201ENST00000477936 615 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 MORF4L2P1-201ENST00000503761 858 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 AP003396.4-201ENST00000527574 265 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 RPA2P1-201ENST00000556557 721 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 AC009852.2-201ENST00000567898 485 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms