Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 AC008764.6-201ENST00000595909 2069 ntBASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01558Q9Y6Z2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01558Q9Y6Z2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 AC009086.3-201ENST00000623486 1008 ntBASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 AC148477.6-201ENST00000623746 465 ntBASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 AC126763.1-201ENST00000552015 2118 ntBASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms