Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TMPOP1-202ENST00000424642 1267 ntBASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 NAPSB-206ENST00000562112 1266 ntBASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 AC018553.1-201ENST00000616682 1458 ntBASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 AC073130.3-201ENST00000624389 2278 ntBASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 KRT8P9-201ENST00000558927 1449 ntBASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 LINC01568-207ENST00000641790 1380 ntBASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 TUBB8P6-201ENST00000436895 1288 ntBASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 AC092865.7-201ENST00000641832 219 ntBASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G3Q9Y6M4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 AL157384.1-201ENST00000445995 2473 ntBASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 KRT18P22-201ENST00000402024 1347 ntBASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G3Q9Y6M4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G3Q9Y6M4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.22■□□□□ 0.67
CSNK1G3Q9Y6M4 PHGDH-210ENST00000641115 1638 ntBASIC19.22■□□□□ 0.67
CSNK1G3Q9Y6M4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1G3Q9Y6M4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1G3Q9Y6M4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1G3Q9Y6M4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.22■□□□□ 0.67
CSNK1G3Q9Y6M4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1G3Q9Y6M4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.22■□□□□ 0.67
CSNK1G3Q9Y6M4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CSNK1G3Q9Y6M4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CSNK1G3Q9Y6M4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CSNK1G3Q9Y6M4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1G3Q9Y6M4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1G3Q9Y6M4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1G3Q9Y6M4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.22■□□□□ 0.67
CSNK1G3Q9Y6M4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1G3Q9Y6M4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms