Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
HCFC2Q9Y5Z7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HCFC2Q9Y5Z7 SLC25A1P2-201ENST00000430693 912 ntBASIC20.64■□□□□ 0.89
HCFC2Q9Y5Z7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.64■□□□□ 0.89
HCFC2Q9Y5Z7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.64■□□□□ 0.89
HCFC2Q9Y5Z7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.64■□□□□ 0.89
HCFC2Q9Y5Z7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HCFC2Q9Y5Z7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
HCFC2Q9Y5Z7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HCFC2Q9Y5Z7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
HCFC2Q9Y5Z7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
HCFC2Q9Y5Z7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HCFC2Q9Y5Z7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 TSPY5P-201ENST00000426936 936 ntBASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 AC007663.1-201ENST00000438948 1240 ntBASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 AC026310.3-201ENST00000625186 2373 ntBASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HCFC2Q9Y5Z7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.62■□□□□ 0.89
HCFC2Q9Y5Z7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HCFC2Q9Y5Z7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HCFC2Q9Y5Z7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HCFC2Q9Y5Z7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
HCFC2Q9Y5Z7 AC006128.1-201ENST00000624704 1661 ntBASIC20.62■□□□□ 0.89
HCFC2Q9Y5Z7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCFC2Q9Y5Z7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCFC2Q9Y5Z7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.62■□□□□ 0.89
HCFC2Q9Y5Z7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HCFC2Q9Y5Z7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HCFC2Q9Y5Z7 AC010653.2-201ENST00000623505 997 ntBASIC20.62■□□□□ 0.89
HCFC2Q9Y5Z7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCFC2Q9Y5Z7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.62■□□□□ 0.89
HCFC2Q9Y5Z7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 COX11P1-201ENST00000489116 835 ntBASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 AC092338.2-201ENST00000568827 1415 ntBASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC2Q9Y5Z7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 AC007225.1-201ENST00000566331 1836 ntBASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 AC092647.4-201ENST00000457211 535 ntBASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms