Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RAI2Q9Y5P3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAI2Q9Y5P3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.91■□□□□ 0.78
RAI2Q9Y5P3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RAI2Q9Y5P3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAI2Q9Y5P3 MIR718-201ENST00000390190 70 ntBASIC19.91■□□□□ 0.78
RAI2Q9Y5P3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.91■□□□□ 0.78
RAI2Q9Y5P3 PRKY-204ENST00000533551 1019 ntBASIC19.91■□□□□ 0.78
RAI2Q9Y5P3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.91■□□□□ 0.78
RAI2Q9Y5P3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAI2Q9Y5P3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.91■□□□□ 0.78
RAI2Q9Y5P3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.91■□□□□ 0.78
RAI2Q9Y5P3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
RAI2Q9Y5P3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
RAI2Q9Y5P3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.91■□□□□ 0.78
RAI2Q9Y5P3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAI2Q9Y5P3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.91■□□□□ 0.78
RAI2Q9Y5P3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 AL023875.1-201ENST00000640777 796 ntBASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.9■□□□□ 0.78
RAI2Q9Y5P3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
RAI2Q9Y5P3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 Z99916.2-201ENST00000604037 246 ntBASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAI2Q9Y5P3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 AP006587.1-201ENST00000534129 1502 ntBASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAI2Q9Y5P3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms