Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.58■□□□□ 0.56
AP4S1Q9Y587 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.58■□□□□ 0.56
AP4S1Q9Y587 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP4S1Q9Y587 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP4S1Q9Y587 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
AP4S1Q9Y587 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP4S1Q9Y587 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP4S1Q9Y587 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP4S1Q9Y587 KRT87P-202ENST00000534226 1464 ntBASIC18.58■□□□□ 0.56
AP4S1Q9Y587 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP4S1Q9Y587 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 MIR572-201ENST00000384983 95 ntBASIC18.57■□□□□ 0.56
AP4S1Q9Y587 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.57■□□□□ 0.56
AP4S1Q9Y587 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP4S1Q9Y587 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 AC008764.7-201ENST00000593779 1081 ntBASIC18.56■□□□□ 0.56
AP4S1Q9Y587 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4S1Q9Y587 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4S1Q9Y587 AC020916.1-201ENST00000587762 1774 ntBASIC18.55■□□□□ 0.56
AP4S1Q9Y587 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4S1Q9Y587 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.55■□□□□ 0.56
AP4S1Q9Y587 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.55■□□□□ 0.56
AP4S1Q9Y587 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
AP4S1Q9Y587 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.55■□□□□ 0.56
AP4S1Q9Y587 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
AP4S1Q9Y587 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.55■□□□□ 0.56
AP4S1Q9Y587 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.55■□□□□ 0.56
AP4S1Q9Y587 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4S1Q9Y587 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
AP4S1Q9Y587 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP4S1Q9Y587 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
AP4S1Q9Y587 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
AP4S1Q9Y587 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4S1Q9Y587 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP4S1Q9Y587 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.55■□□□□ 0.56
AP4S1Q9Y587 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4S1Q9Y587 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.54■□□□□ 0.56
AP4S1Q9Y587 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
AP4S1Q9Y587 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP4S1Q9Y587 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP4S1Q9Y587 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4S1Q9Y587 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
AP4S1Q9Y587 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4S1Q9Y587 AC091799.1-201ENST00000422823 811 ntBASIC18.54■□□□□ 0.56
AP4S1Q9Y587 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP4S1Q9Y587 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.54■□□□□ 0.56
AP4S1Q9Y587 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4S1Q9Y587 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4S1Q9Y587 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP4S1Q9Y587 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP4S1Q9Y587 LTB4R2-202ENST00000528054 3092 ntBASIC18.54■□□□□ 0.56
AP4S1Q9Y587 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.54■□□□□ 0.56
AP4S1Q9Y587 AP001271.2-201ENST00000624018 1556 ntBASIC18.54■□□□□ 0.56
AP4S1Q9Y587 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4S1Q9Y587 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP4S1Q9Y587 AL161938.1-201ENST00000569833 2180 ntBASIC18.54■□□□□ 0.56
AP4S1Q9Y587 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms