Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRAF6Q9Y4K3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRAF6Q9Y4K3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.14■□□□□ 0.66
TRAF6Q9Y4K3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRAF6Q9Y4K3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF6Q9Y4K3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAF6Q9Y4K3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF6Q9Y4K3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.14■□□□□ 0.65
TRAF6Q9Y4K3 CYP2T1P-201ENST00000432607 1285 ntBASIC19.14■□□□□ 0.65
TRAF6Q9Y4K3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.14■□□□□ 0.65
TRAF6Q9Y4K3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF6Q9Y4K3 RARRES2P6-201ENST00000567333 442 ntBASIC19.14■□□□□ 0.65
TRAF6Q9Y4K3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF6Q9Y4K3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRAF6Q9Y4K3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAF6Q9Y4K3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF6Q9Y4K3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAF6Q9Y4K3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 AL589743.5-201ENST00000616611 1050 ntBASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRAF6Q9Y4K3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 AC006015.1-201ENST00000429970 570 ntBASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 AC093503.3-201ENST00000624917 2352 ntBASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 LINC01465-201ENST00000408887 1940 ntBASIC19.12■□□□□ 0.65
TRAF6Q9Y4K3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 AC010980.2-201ENST00000587099 1412 ntBASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAF6Q9Y4K3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms