Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP3Q9Y446 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.75■□□□□ 0.75
PKP3Q9Y446 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.75■□□□□ 0.75
PKP3Q9Y446 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.75■□□□□ 0.75
PKP3Q9Y446 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.75■□□□□ 0.75
PKP3Q9Y446 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PKP3Q9Y446 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PKP3Q9Y446 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.75■□□□□ 0.75
PKP3Q9Y446 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP3Q9Y446 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.75■□□□□ 0.75
PKP3Q9Y446 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PKP3Q9Y446 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP3Q9Y446 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.75■□□□□ 0.75
PKP3Q9Y446 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKP3Q9Y446 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKP3Q9Y446 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.74■□□□□ 0.75
PKP3Q9Y446 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.74■□□□□ 0.75
PKP3Q9Y446 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKP3Q9Y446 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKP3Q9Y446 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PKP3Q9Y446 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKP3Q9Y446 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PKP3Q9Y446 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PKP3Q9Y446 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PKP3Q9Y446 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PKP3Q9Y446 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.74■□□□□ 0.75
PKP3Q9Y446 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PKP3Q9Y446 AL121829.2-201ENST00000620908 328 ntBASIC19.74■□□□□ 0.75
PKP3Q9Y446 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PKP3Q9Y446 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PKP3Q9Y446 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKP3Q9Y446 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKP3Q9Y446 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PKP3Q9Y446 TFP1-202ENST00000475455 1573 ntBASIC19.74■□□□□ 0.75
PKP3Q9Y446 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.74■□□□□ 0.75
PKP3Q9Y446 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKP3Q9Y446 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.73■□□□□ 0.75
PKP3Q9Y446 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKP3Q9Y446 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKP3Q9Y446 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKP3Q9Y446 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.73■□□□□ 0.75
PKP3Q9Y446 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.73■□□□□ 0.75
PKP3Q9Y446 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKP3Q9Y446 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKP3Q9Y446 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.73■□□□□ 0.75
PKP3Q9Y446 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKP3Q9Y446 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKP3Q9Y446 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKP3Q9Y446 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKP3Q9Y446 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKP3Q9Y446 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PKP3Q9Y446 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKP3Q9Y446 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKP3Q9Y446 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKP3Q9Y446 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PKP3Q9Y446 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.73■□□□□ 0.75
PKP3Q9Y446 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.73■□□□□ 0.75
PKP3Q9Y446 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP3Q9Y446 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP3Q9Y446 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.72■□□□□ 0.75
PKP3Q9Y446 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP3Q9Y446 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP3Q9Y446 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP3Q9Y446 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP3Q9Y446 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
PKP3Q9Y446 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP3Q9Y446 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.72■□□□□ 0.75
PKP3Q9Y446 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.72■□□□□ 0.75
PKP3Q9Y446 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.72■□□□□ 0.75
PKP3Q9Y446 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.72■□□□□ 0.75
PKP3Q9Y446 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.72■□□□□ 0.75
PKP3Q9Y446 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.72■□□□□ 0.75
PKP3Q9Y446 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.72■□□□□ 0.75
PKP3Q9Y446 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.72■□□□□ 0.75
PKP3Q9Y446 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PKP3Q9Y446 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.72■□□□□ 0.75
PKP3Q9Y446 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PKP3Q9Y446 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP3Q9Y446 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP3Q9Y446 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PKP3Q9Y446 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PKP3Q9Y446 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PKP3Q9Y446 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP3Q9Y446 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PKP3Q9Y446 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PKP3Q9Y446 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.71■□□□□ 0.75
PKP3Q9Y446 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP3Q9Y446 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP3Q9Y446 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.71■□□□□ 0.75
PKP3Q9Y446 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.71■□□□□ 0.75
PKP3Q9Y446 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.71■□□□□ 0.75
PKP3Q9Y446 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.71■□□□□ 0.75
PKP3Q9Y446 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PKP3Q9Y446 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
PKP3Q9Y446 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PKP3Q9Y446 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PKP3Q9Y446 PRKY-204ENST00000533551 1019 ntBASIC19.71■□□□□ 0.75
PKP3Q9Y446 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PKP3Q9Y446 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PKP3Q9Y446 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms