Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 KRT17P3-201ENST00000420566 1262 ntBASIC19.03■□□□□ 0.64
CUEDC1Q9NWM3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.03■□□□□ 0.64
CUEDC1Q9NWM3 FAM210CP-201ENST00000445714 574 ntBASIC19.03■□□□□ 0.64
CUEDC1Q9NWM3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CUEDC1Q9NWM3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.03■□□□□ 0.64
CUEDC1Q9NWM3 AC073912.3-201ENST00000624414 853 ntBASIC19.03■□□□□ 0.64
CUEDC1Q9NWM3 AC073648.6-201ENST00000641589 218 ntBASIC19.03■□□□□ 0.64
CUEDC1Q9NWM3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CUEDC1Q9NWM3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.03■□□□□ 0.64
CUEDC1Q9NWM3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.03■□□□□ 0.64
CUEDC1Q9NWM3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CUEDC1Q9NWM3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CUEDC1Q9NWM3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.03■□□□□ 0.64
CUEDC1Q9NWM3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CUEDC1Q9NWM3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CUEDC1Q9NWM3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CUEDC1Q9NWM3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CUEDC1Q9NWM3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CUEDC1Q9NWM3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CUEDC1Q9NWM3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.02■□□□□ 0.64
CUEDC1Q9NWM3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CUEDC1Q9NWM3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CUEDC1Q9NWM3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.02■□□□□ 0.64
CUEDC1Q9NWM3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CUEDC1Q9NWM3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CUEDC1Q9NWM3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CUEDC1Q9NWM3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.02■□□□□ 0.64
CUEDC1Q9NWM3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CUEDC1Q9NWM3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CUEDC1Q9NWM3 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.02■□□□□ 0.64
CUEDC1Q9NWM3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CUEDC1Q9NWM3 AL121906.2-201ENST00000621597 723 ntBASIC19.02■□□□□ 0.64
CUEDC1Q9NWM3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CUEDC1Q9NWM3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.02■□□□□ 0.64
CUEDC1Q9NWM3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.02■□□□□ 0.63
CUEDC1Q9NWM3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CUEDC1Q9NWM3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.02■□□□□ 0.63
CUEDC1Q9NWM3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CUEDC1Q9NWM3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CUEDC1Q9NWM3 TFP1-202ENST00000475455 1573 ntBASIC19.02■□□□□ 0.63
CUEDC1Q9NWM3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.02■□□□□ 0.63
CUEDC1Q9NWM3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 TMEM179-206ENST00000616017 1645 ntBASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 AP001271.2-201ENST00000624018 1556 ntBASIC19.01■□□□□ 0.63
CUEDC1Q9NWM3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 AL121829.2-201ENST00000620908 328 ntBASIC19■□□□□ 0.63
CUEDC1Q9NWM3 AC009237.14-201ENST00000609975 1594 ntBASIC19■□□□□ 0.63
CUEDC1Q9NWM3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 BID-204ENST00000399767 2129 ntTSL 2 BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 MME-217ENST00000616757 1315 ntTSL 5 BASIC19■□□□□ 0.63
CUEDC1Q9NWM3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms