Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GDF3Q9NR23 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GDF3Q9NR23 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
GDF3Q9NR23 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
GDF3Q9NR23 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GDF3Q9NR23 AC097658.1-201ENST00000475555 843 ntBASIC20.73■□□□□ 0.91
GDF3Q9NR23 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.73■□□□□ 0.91
GDF3Q9NR23 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.73■□□□□ 0.91
GDF3Q9NR23 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
GDF3Q9NR23 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GDF3Q9NR23 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.73■□□□□ 0.91
GDF3Q9NR23 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
GDF3Q9NR23 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GDF3Q9NR23 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.73■□□□□ 0.91
GDF3Q9NR23 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.73■□□□□ 0.91
GDF3Q9NR23 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.73■□□□□ 0.91
GDF3Q9NR23 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF3Q9NR23 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF3Q9NR23 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF3Q9NR23 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GDF3Q9NR23 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
GDF3Q9NR23 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.72■□□□□ 0.91
GDF3Q9NR23 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.72■□□□□ 0.91
GDF3Q9NR23 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF3Q9NR23 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF3Q9NR23 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.72■□□□□ 0.91
GDF3Q9NR23 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF3Q9NR23 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF3Q9NR23 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GDF3Q9NR23 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF3Q9NR23 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF3Q9NR23 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.72■□□□□ 0.91
GDF3Q9NR23 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF3Q9NR23 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF3Q9NR23 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.72■□□□□ 0.91
GDF3Q9NR23 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.71■□□□□ 0.91
GDF3Q9NR23 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GDF3Q9NR23 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
GDF3Q9NR23 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
GDF3Q9NR23 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GDF3Q9NR23 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.71■□□□□ 0.91
GDF3Q9NR23 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
GDF3Q9NR23 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GDF3Q9NR23 RARRES2P4-201ENST00000514074 484 ntBASIC20.71■□□□□ 0.91
GDF3Q9NR23 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.71■□□□□ 0.91
GDF3Q9NR23 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.71■□□□□ 0.91
GDF3Q9NR23 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.71■□□□□ 0.91
GDF3Q9NR23 AC008687.6-201ENST00000596318 630 ntBASIC20.71■□□□□ 0.91
GDF3Q9NR23 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
GDF3Q9NR23 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
GDF3Q9NR23 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
GDF3Q9NR23 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
GDF3Q9NR23 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GDF3Q9NR23 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.71■□□□□ 0.91
GDF3Q9NR23 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GDF3Q9NR23 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.71■□□□□ 0.91
GDF3Q9NR23 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.7■□□□□ 0.91
GDF3Q9NR23 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.7■□□□□ 0.91
GDF3Q9NR23 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.7■□□□□ 0.91
GDF3Q9NR23 AC010980.2-201ENST00000587099 1412 ntBASIC20.7■□□□□ 0.9
GDF3Q9NR23 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
GDF3Q9NR23 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
GDF3Q9NR23 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GDF3Q9NR23 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
GDF3Q9NR23 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
GDF3Q9NR23 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GDF3Q9NR23 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GDF3Q9NR23 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
GDF3Q9NR23 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
GDF3Q9NR23 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
GDF3Q9NR23 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.7■□□□□ 0.9
GDF3Q9NR23 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GDF3Q9NR23 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
GDF3Q9NR23 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.7■□□□□ 0.9
GDF3Q9NR23 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GDF3Q9NR23 AL032819.2-201ENST00000624543 2162 ntBASIC20.7■□□□□ 0.9
GDF3Q9NR23 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GDF3Q9NR23 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
GDF3Q9NR23 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
GDF3Q9NR23 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
GDF3Q9NR23 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
GDF3Q9NR23 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GDF3Q9NR23 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDF3Q9NR23 AL138781.2-201ENST00000617896 1843 ntBASIC20.69■□□□□ 0.9
GDF3Q9NR23 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDF3Q9NR23 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
GDF3Q9NR23 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.69■□□□□ 0.9
GDF3Q9NR23 AC009237.14-201ENST00000609975 1594 ntBASIC20.69■□□□□ 0.9
GDF3Q9NR23 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDF3Q9NR23 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.69■□□□□ 0.9
GDF3Q9NR23 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.69■□□□□ 0.9
GDF3Q9NR23 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
GDF3Q9NR23 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.69■□□□□ 0.9
GDF3Q9NR23 AC083880.1-201ENST00000608266 535 ntBASIC20.69■□□□□ 0.9
GDF3Q9NR23 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.69■□□□□ 0.9
GDF3Q9NR23 MYC-209ENST00000641252 345 ntBASIC20.69■□□□□ 0.9
GDF3Q9NR23 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GDF3Q9NR23 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.69■□□□□ 0.9
GDF3Q9NR23 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDF3Q9NR23 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms