Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 AC239800.4-201ENST00000603712 296 ntBASIC18.88■□□□□ 0.61
SPTBN4Q9H254 AL390719.2-201ENST00000606993 987 ntBASIC18.88■□□□□ 0.61
SPTBN4Q9H254 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.88■□□□□ 0.61
SPTBN4Q9H254 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 MIR940-201ENST00000401276 94 ntBASIC18.88■□□□□ 0.61
SPTBN4Q9H254 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 KRT18P67-201ENST00000432816 1264 ntBASIC18.88■□□□□ 0.61
SPTBN4Q9H254 TSSC2-201ENST00000450217 709 ntBASIC18.88■□□□□ 0.61
SPTBN4Q9H254 CA15P1-201ENST00000481698 905 ntBASIC18.88■□□□□ 0.61
SPTBN4Q9H254 Z85996.1-201ENST00000494644 937 ntBASIC18.88■□□□□ 0.61
SPTBN4Q9H254 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 AC010327.4-202ENST00000591484 748 ntBASIC18.88■□□□□ 0.61
SPTBN4Q9H254 AC064862.7-201ENST00000604520 867 ntBASIC18.88■□□□□ 0.61
SPTBN4Q9H254 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.88■□□□□ 0.61
SPTBN4Q9H254 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPTBN4Q9H254 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPTBN4Q9H254 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SPTBN4Q9H254 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.87■□□□□ 0.61
SPTBN4Q9H254 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.87■□□□□ 0.61
SPTBN4Q9H254 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.87■□□□□ 0.61
SPTBN4Q9H254 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.87■□□□□ 0.61
SPTBN4Q9H254 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.87■□□□□ 0.61
SPTBN4Q9H254 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPTBN4Q9H254 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.87■□□□□ 0.61
SPTBN4Q9H254 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPTBN4Q9H254 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SPTBN4Q9H254 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SPTBN4Q9H254 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.87■□□□□ 0.61
SPTBN4Q9H254 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.87■□□□□ 0.61
SPTBN4Q9H254 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.87■□□□□ 0.61
SPTBN4Q9H254 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SPTBN4Q9H254 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SPTBN4Q9H254 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.86■□□□□ 0.61
SPTBN4Q9H254 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPTBN4Q9H254 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPTBN4Q9H254 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SPTBN4Q9H254 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.86■□□□□ 0.61
SPTBN4Q9H254 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
SPTBN4Q9H254 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPTBN4Q9H254 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.86■□□□□ 0.61
SPTBN4Q9H254 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.86■□□□□ 0.61
SPTBN4Q9H254 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.86■□□□□ 0.61
SPTBN4Q9H254 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPTBN4Q9H254 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.86■□□□□ 0.61
SPTBN4Q9H254 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.86■□□□□ 0.61
SPTBN4Q9H254 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPTBN4Q9H254 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SPTBN4Q9H254 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPTBN4Q9H254 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.85■□□□□ 0.61
SPTBN4Q9H254 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPTBN4Q9H254 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.85■□□□□ 0.61
SPTBN4Q9H254 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPTBN4Q9H254 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.85■□□□□ 0.61
SPTBN4Q9H254 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.85■□□□□ 0.61
SPTBN4Q9H254 AC243591.1-201ENST00000452967 1364 ntBASIC18.85■□□□□ 0.61
SPTBN4Q9H254 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPTBN4Q9H254 AL031284.1-201ENST00000419297 478 ntBASIC18.85■□□□□ 0.61
SPTBN4Q9H254 AC098831.1-202ENST00000438821 336 ntBASIC18.85■□□□□ 0.61
SPTBN4Q9H254 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SPTBN4Q9H254 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPTBN4Q9H254 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPTBN4Q9H254 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPTBN4Q9H254 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.84■□□□□ 0.61
SPTBN4Q9H254 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.84■□□□□ 0.61
SPTBN4Q9H254 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPTBN4Q9H254 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPTBN4Q9H254 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPTBN4Q9H254 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPTBN4Q9H254 RNPS1P1-201ENST00000507437 918 ntBASIC18.84■□□□□ 0.61
SPTBN4Q9H254 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.84■□□□□ 0.61
SPTBN4Q9H254 AL121772.3-201ENST00000610840 674 ntBASIC18.84■□□□□ 0.61
SPTBN4Q9H254 REXO1L6P-202ENST00000619970 1078 ntBASIC18.84■□□□□ 0.61
SPTBN4Q9H254 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.84■□□□□ 0.61
SPTBN4Q9H254 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPTBN4Q9H254 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SPTBN4Q9H254 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.83■□□□□ 0.61
SPTBN4Q9H254 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPTBN4Q9H254 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SPTBN4Q9H254 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.83■□□□□ 0.6
SPTBN4Q9H254 AP003041.3-201ENST00000527151 707 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms