Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC46A2Q9BY10 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC46A2Q9BY10 AC073314.1-201ENST00000568729 2216 ntBASIC20.34■□□□□ 0.85
SLC46A2Q9BY10 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC46A2Q9BY10 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC46A2Q9BY10 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC46A2Q9BY10 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC46A2Q9BY10 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC46A2Q9BY10 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC46A2Q9BY10 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC46A2Q9BY10 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SLC46A2Q9BY10 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SLC46A2Q9BY10 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC46A2Q9BY10 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC46A2Q9BY10 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SLC46A2Q9BY10 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SLC46A2Q9BY10 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.85
SLC46A2Q9BY10 AC008040.2-201ENST00000461049 708 ntBASIC20.33■□□□□ 0.85
SLC46A2Q9BY10 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.33■□□□□ 0.85
SLC46A2Q9BY10 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.33■□□□□ 0.85
SLC46A2Q9BY10 AC073508.3-201ENST00000619697 1419 ntBASIC20.33■□□□□ 0.84
SLC46A2Q9BY10 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SLC46A2Q9BY10 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.33■□□□□ 0.84
SLC46A2Q9BY10 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 TERF1P1-201ENST00000311003 1181 ntBASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 CRYGFP-201ENST00000418459 633 ntBASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 KRT18P57-201ENST00000443599 1254 ntBASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 SLC25A3P1-201ENST00000443844 931 ntBASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 AL445228.2-201ENST00000605589 952 ntBASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 RCC2P6-201ENST00000526625 1557 ntBASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC46A2Q9BY10 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 AL137013.1-201ENST00000432946 1228 ntBASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC46A2Q9BY10 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC46A2Q9BY10 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
SLC46A2Q9BY10 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC46A2Q9BY10 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SLC46A2Q9BY10 C2orf69P3-201ENST00000565542 1120 ntBASIC20.3■□□□□ 0.84
SLC46A2Q9BY10 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC46A2Q9BY10 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC46A2Q9BY10 AP000692.2-201ENST00000608391 879 ntBASIC20.3■□□□□ 0.84
SLC46A2Q9BY10 AC011298.2-201ENST00000617989 482 ntBASIC20.3■□□□□ 0.84
SLC46A2Q9BY10 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC46A2Q9BY10 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC46A2Q9BY10 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC46A2Q9BY10 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC46A2Q9BY10 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC46A2Q9BY10 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC46A2Q9BY10 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC46A2Q9BY10 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC46A2Q9BY10 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC46A2Q9BY10 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SLC46A2Q9BY10 KRT8P8-201ENST00000434750 1448 ntBASIC20.29■□□□□ 0.84
SLC46A2Q9BY10 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC46A2Q9BY10 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms